Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00324 ACAATGGAGTGCCAGAATCAGCAACAAAACCGATCAGAGCAACTACCAATGCAAATGCCAATTGATCATCAGTTGCAGAACCCCGATGGGTTGTTCGTAAAGGTGATGACGGACGAACAAATGGAGCTTCTCCAGCGGCAGATCTCCGTCTATGCTTCCATTTGTGAACAGCTTGTCGAGATGCACAAGGCTATGACCGCCCAACAGGACCTTACTGGTATGAAACCGGGGAATCTATATTATGATCCAATGACGGCATCTAGTGGGCACAAGATTACGGCTCGGCAAAGGTGGACGCCAACGCCGATGCAGCTTCAAATACTCGAACATATTTTTGACAAAGGAAATGGCGCTCCAAGTAAGCAGAAGATTAGGGAGATAACTATCGACCTTTCACAACACGGGCAAATCTCGGAAGCAAATGTGTATAATTGGTTCCAGAACAGAAGAGCACGCAGTAAAAGAAAGCAGTCAGCTTCAATCCCTAACAATGCAGATTCAGAAGTGGAAACAGAAGTAGAGTCTCCAACGGAAGTGGGTGTCCAATCATTTGAGAATCATGCACATAGAAGTGGTGATGTCTACGGGAAATCCGAGTTAGGCGATGAAATGCAACCTGTTTTTCACTTGAGATCTTGTAACTCAGACCCTATGAGTGCCATGCCAAATCAGAGTACGTATTCTCATGCATTAAAATCCATTTCTTTGGGTTGTATAAAGCATTCTATGTTTTCCAAACTATACTATCGTTGA 753 44.22 TMECQNQQQNRSEQLPMQMPIDHQLQNPDGLFVKVMTDEQMELLQRQISVYASICEQLVEMHKAMTAQQDLTGMKPGNLYYDPMTASSGHKITARQRWTPTPMQLQILEHIFDKGNGAPSKQKIREITIDLSQHGQISEANVYNWFQNRRARSKRKQSASIPNNADSEVETEVESPTEVGVQSFENHAHRSGDVYGKSELGDEMQPVFHLRSCNSDPMSAMPNQSTYSHALKSISLGCIKHSMFSKLYYR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2762501 2764027 + Bda016284.1 Bda03g00324 3583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00324 250 SUPERFAMILY Homeodomain-like 94 159 IPR009057 -
Bda03g00324 250 Pfam Homeodomain 95 155 IPR001356 GO:0003677
Bda03g00324 250 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 222 IPR044559 GO:0003700
Bda03g00324 250 MobiDBLite consensus disorder prediction 153 172 - -
Bda03g00324 250 Gene3D - 97 160 - -
Bda03g00324 250 SMART HOX_1 93 160 IPR001356 GO:0003677
Bda03g00324 250 ProSiteProfiles 'Homeobox' domain profile. 91 156 IPR001356 GO:0003677
Bda03g00324 250 PANTHER - 2 222 - -
Bda03g00324 250 CDD homeodomain 95 157 IPR001356 GO:0003677
Bda03g00324 250 MobiDBLite consensus disorder prediction 157 172 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00324 Bda11g00976 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00324 Bda-Chr3:2762501 Bda11g01811 Bda-Chr11:53266261 1.23E-74 dispersed
Bda05g00996 Bda-Chr5:58390582 Bda03g00324 Bda-Chr3:2762501 4.20E-06 dispersed
Bda04g00024 Bda-Chr4:387129 Bda03g00324 Bda-Chr3:2762501 3.68E-10 transposed
Bda11g00976 Bda-Chr11:9505207 Bda03g00324 Bda-Chr3:2762501 2.81E-128 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15638 PF00046 Homeodomain 6.80E-17 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00324 - - bhj:120085747 271.166