Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00324 | ACAATGGAGTGCCAGAATCAGCAACAAAACCGATCAGAGCAACTACCAATGCAAATGCCAATTGATCATCAGTTGCAGAACCCCGATGGGTTGTTCGTAAAGGTGATGACGGACGAACAAATGGAGCTTCTCCAGCGGCAGATCTCCGTCTATGCTTCCATTTGTGAACAGCTTGTCGAGATGCACAAGGCTATGACCGCCCAACAGGACCTTACTGGTATGAAACCGGGGAATCTATATTATGATCCAATGACGGCATCTAGTGGGCACAAGATTACGGCTCGGCAAAGGTGGACGCCAACGCCGATGCAGCTTCAAATACTCGAACATATTTTTGACAAAGGAAATGGCGCTCCAAGTAAGCAGAAGATTAGGGAGATAACTATCGACCTTTCACAACACGGGCAAATCTCGGAAGCAAATGTGTATAATTGGTTCCAGAACAGAAGAGCACGCAGTAAAAGAAAGCAGTCAGCTTCAATCCCTAACAATGCAGATTCAGAAGTGGAAACAGAAGTAGAGTCTCCAACGGAAGTGGGTGTCCAATCATTTGAGAATCATGCACATAGAAGTGGTGATGTCTACGGGAAATCCGAGTTAGGCGATGAAATGCAACCTGTTTTTCACTTGAGATCTTGTAACTCAGACCCTATGAGTGCCATGCCAAATCAGAGTACGTATTCTCATGCATTAAAATCCATTTCTTTGGGTTGTATAAAGCATTCTATGTTTTCCAAACTATACTATCGTTGA | 753 | 44.22 | TMECQNQQQNRSEQLPMQMPIDHQLQNPDGLFVKVMTDEQMELLQRQISVYASICEQLVEMHKAMTAQQDLTGMKPGNLYYDPMTASSGHKITARQRWTPTPMQLQILEHIFDKGNGAPSKQKIREITIDLSQHGQISEANVYNWFQNRRARSKRKQSASIPNNADSEVETEVESPTEVGVQSFENHAHRSGDVYGKSELGDEMQPVFHLRSCNSDPMSAMPNQSTYSHALKSISLGCIKHSMFSKLYYR | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2762501 | 2764027 | + | Bda016284.1 | Bda03g00324 | 3583 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00324 | 250 | SUPERFAMILY | Homeodomain-like | 94 | 159 | IPR009057 | - | |
Bda03g00324 | 250 | Pfam | Homeodomain | 95 | 155 | IPR001356 | GO:0003677 | |
Bda03g00324 | 250 | PANTHER | WUSCHEL-RELATED HOMEOBOX 13 | 2 | 222 | IPR044559 | GO:0003700 | |
Bda03g00324 | 250 | MobiDBLite | consensus disorder prediction | 153 | 172 | - | - | |
Bda03g00324 | 250 | Gene3D | - | 97 | 160 | - | - | |
Bda03g00324 | 250 | SMART | HOX_1 | 93 | 160 | IPR001356 | GO:0003677 | |
Bda03g00324 | 250 | ProSiteProfiles | 'Homeobox' domain profile. | 91 | 156 | IPR001356 | GO:0003677 | |
Bda03g00324 | 250 | PANTHER | - | 2 | 222 | - | - | |
Bda03g00324 | 250 | CDD | homeodomain | 95 | 157 | IPR001356 | GO:0003677 | |
Bda03g00324 | 250 | MobiDBLite | consensus disorder prediction | 157 | 172 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g00324 | Bda11g00976 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00324 | Bda-Chr3:2762501 | Bda11g01811 | Bda-Chr11:53266261 | 1.23E-74 | dispersed | |
Bda05g00996 | Bda-Chr5:58390582 | Bda03g00324 | Bda-Chr3:2762501 | 4.20E-06 | dispersed | |
Bda04g00024 | Bda-Chr4:387129 | Bda03g00324 | Bda-Chr3:2762501 | 3.68E-10 | transposed | |
Bda11g00976 | Bda-Chr11:9505207 | Bda03g00324 | Bda-Chr3:2762501 | 2.81E-128 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15638 | PF00046 | Homeodomain | 6.80E-17 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00324 | - | - | bhj:120085747 | 271.166 |