Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00327 ATGGCTGCTGGTATGGATTATTCGCGTACATTTACATTGGTAGAGGGAAATTACAACAAAGACAATGGTTCAGCCGCACAAGATGAGGATGCCAATGACTTGAATAATATAAAACAAATGAACAATGGGAAACCTCCACGGCATCTCTCCATAATGCGCCATAGTATTAGCTCAATGAAGCTGATTGGCCCTACTGATTTGAGTTCAGATACTGCGTTCGACGAGAGTAAGTTACCAGATGAAAAGACAGAATTTGTACCTGTTTTCAGATCAGGAAGTTGTGCTGAAAGAGGACCTAAACAGTATATGGAGGATGAACACATTTGTATCGATGATCTCTTTGAACATATAGGTCCAATCTCTGAGATCATGTCTCCTTGGTCTTTTTATGGGGTGTTTGATGGTCATGGTGGTACAGATGCAGCATCATTTGTGAGAAATAATATCCTCAGATTCACAGTCGAGGATTCTGATTTTCCCGTTAGTATGGAGAAAGCAATTAAAAGTGCTTTTCTAAAAGCTGATTATGCATTTGCTGACACCAGCTCCTTTGATGTTTCCTCTGGTACGACCGCCCTAACTGCCTTTATCTTGGGAAGATCACTGATAATTGCCAATGCTGGTGATTGTAGAGCAGTTTTGGGAAGGCGGGGTCGAGCAATTGAAATGTCAAAAGACCACAAACCCAACTGCCAATCGGAAAGACAGAGAATTGAGAAACTTGGTGGAGTAATTTACGATGGTTATCTCAATGGCCAGCTATCTGTTTCTCGGGCCATAGGAGATTGGCACATGAAAGGTGCTAAAGGACAGGCATGCCCATTGAGTGCTGAGCCAGAGTTGCAAGAAATGCTCTTGACGGAGGATGATGAGTTTTTAATAATGGGATGTGATGGGCTGTGGGATGTAATGAGCAGTCAGTGCGCTGTCACTATGGCAAGGAAAGAGCTAATGCTCCACAATGACCCTGAAAGATGTTCAAGAGAGTTGGTGAGAGAGGCTCTCAAGCGCAACACATGTGATAATTTGACAGTCATCATGATTTGCTTTTCTCAAGACCCTCCCCCTCGAATAGAGATACCTCCATCTCGAGTGAGGAGGAGTATATCGGCGGAGGGTCTGAATCTGTTGAAAGGTGTATTGGACTGCAATTGA 1155 43.38 MAAGMDYSRTFTLVEGNYNKDNGSAAQDEDANDLNNIKQMNNGKPPRHLSIMRHSISSMKLIGPTDLSSDTAFDESKLPDEKTEFVPVFRSGSCAERGPKQYMEDEHICIDDLFEHIGPISEIMSPWSFYGVFDGHGGTDAASFVRNNILRFTVEDSDFPVSMEKAIKSAFLKADYAFADTSSFDVSSGTTALTAFILGRSLIIANAGDCRAVLGRRGRAIEMSKDHKPNCQSERQRIEKLGGVIYDGYLNGQLSVSRAIGDWHMKGAKGQACPLSAEPELQEMLLTEDDEFLIMGCDGLWDVMSSQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIMICFSQDPPPRIEIPPSRVRRSISAEGLNLLKGVLDCN 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2778851 2781061 - Bda016287.1 Bda03g00327 3586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00327 384 CDD PP2Cc 89 350 IPR001932 -
Bda03g00327 384 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
Bda03g00327 384 SMART PP2C_4 80 348 IPR001932 -
Bda03g00327 384 Gene3D - 74 354 IPR036457 -
Bda03g00327 384 SUPERFAMILY PP2C-like 84 351 IPR036457 -
Bda03g00327 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Bda03g00327 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Bda03g00327 384 Pfam Protein phosphatase 2C 91 342 IPR001932 -
Bda03g00327 384 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 372 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00327 Bda11g00979 CCT
Bda03g00327 Bda11g00979 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00327 Bda-Chr3:2778851 Bda13g01275 Bda-Chr13:35110645 3.46E-114 dispersed
Bda11g00979 Bda-Chr11:9516047 Bda03g00327 Bda-Chr3:2778851 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00327 K14803 - qsu:112023621 630.943