Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00332 | ATGACTCGTCCTTTTAGGCTTCTAACCGGTGGTGCGAACTCCCCGGCGAGCGACGACCATTGGCCTATACCTGATCCGAACGACTCCGACATCGTAATCGTACTCGCCGCTCTTCTCTGTGCCTTAATTTGCGTTCTGGGTCTCATAGCCGTCGCTCGTTGCACCTGGATTCGCCACCTCTCCGGCAGCGGTGGCTCAGCTCCCGCCTCCACCAACCGTAATCCTCCGGCGCCCACATCAAACAAAGGGCTTAAGAAGAAAATTTTAAGGTCTCTCCCAAAAGTCACTTTCACAGCAGAGTCCGAGTCTCATCTATCAGACTGCGCGATCTGTCTTGCCGATTTCGTCACCGGGGACGAAATCAGAGTTCTTCCGCAGTGCGGCCATGTCTTCCACGTGGGCTGCATCGATACGTGGTTCGGATCACATTCCTCCTGCCCATCTTGCCGAAAGGTTTTGGCGGTATCTAGGTGCCAGAAGTGCGGCGATTTCTCTGCGAGCTCAAGCACTGGTTCGGCAAGTGAAGCCAGATTGAAGGAGACGCAAGACAATGCAAATAGGTTCTTACCCTAG | 573 | 54.28 | MTRPFRLLTGGANSPASDDHWPIPDPNDSDIVIVLAALLCALICVLGLIAVARCTWIRHLSGSGGSAPASTNRNPPAPTSNKGLKKKILRSLPKVTFTAESESHLSDCAICLADFVTGDEIRVLPQCGHVFHVGCIDTWFGSHSSCPSCRKVLAVSRCQKCGDFSASSSTGSASEARLKETQDNANRFLP | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2799378 | 2799950 | - | Bda016292.1 | Bda03g00332 | 3591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00332 | 190 | MobiDBLite | consensus disorder prediction | 164 | 190 | - | - | |
Bda03g00332 | 190 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 184 | - | - | |
Bda03g00332 | 190 | SMART | FANCL_C_2 | 104 | 158 | - | - | |
Bda03g00332 | 190 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 155 | IPR013083 | - | |
Bda03g00332 | 190 | Pfam | Ring finger domain | 107 | 150 | IPR001841 | - | |
Bda03g00332 | 190 | MobiDBLite | consensus disorder prediction | 62 | 83 | - | - | |
Bda03g00332 | 190 | SUPERFAMILY | RING/U-box | 89 | 155 | - | - | |
Bda03g00332 | 190 | MobiDBLite | consensus disorder prediction | 64 | 79 | - | - | |
Bda03g00332 | 190 | CDD | RING-H2_EL5_like | 107 | 150 | - | - | |
Bda03g00332 | 190 | ProSiteProfiles | Zinc finger RING-type profile. | 108 | 150 | IPR001841 | - | |
Bda03g00332 | 190 | MobiDBLite | consensus disorder prediction | 164 | 179 | - | - | |
Bda03g00332 | 190 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda03g00332 | 190 | PANTHER | RING-H2 FINGER PROTEIN ATL8 | 1 | 184 | - | - | |
Bda03g00332 | 190 | SMART | ring_2 | 108 | 149 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00332 | Bda-Chr3:2799378 | Bda14g00192 | Bda-Chr14:1369540 | 1.52E-30 | dispersed | |
Bda11g00985 | Bda-Chr11:9555561 | Bda03g00332 | Bda-Chr3:2799378 | 4.31E-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00332 | - | - | tcc:18591745 | 238.424 |