Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00348 | ATGGGCTGTATTTGCTCGAAAGAATCCCCAGAACCAAAGGAAGTCGATGACAACGAGGAAGCGGGAGAGTTTAACAAGACTTCAGACCAATCGGGCACTCCTACTCCTTCAAAGAGGGAAGATTTTGTTCTAAAAATAAGAGGCAGTGTTCAAAATGTTGGTTTAGTTAGCTTTTTATCGAGGCAGGCGTCACAAACAAATGGGGGTCCAGTTCAAGTGCGAAAAGGGAAAAATGGAAGTTCCAATGATGAAGAAAACAAAGCGAGAAATAACGAAAGAAGAAGAAAGGATCATAATCAGAAATTGGCGAAGAAGGATGTGAGAGTGAATGGAAAACTACCGCAGATGTCAAGAATAGTCAGCCTCCCAAATGGAGCAGAAGGTGGACAAGTTTTTGCTGGATGGCCATCTTGGTTAACTTCAGTAGCCGGAGATGCCATCAAAGGATGGATTCCTCGACGAGCAGACTCCTTTGAGAAGCTAGACAAAATTGGTCAGGGAACTTACAGCAGTGTATATAGGGCCCGTGACTTGGAAACTGGTAAAATTGTTGCATTGAAGAAAGTAAGATTTGTAAATATGGATCCAGAAAGTGTACGTTTTATGGCTAGAGAAATATGTATTATGCGTGAACTTGATCATCCAAATGTTATGAAGCTTGAGGGTTTAGTTACATCCAGATTGTCATGCAGCTTGTACCTTGTCTTTGAGTACATGGAACATGACCTAGCTGGGCTCGTAGCAACTCCTGGCATCAAGTTTACAGAGCCGCAGATTAAATGCTTTATGCAACAACTATTACATGGGCTTGAACACTGCCACAGTCGTGGTGTTCTGCACCGAGACATCAAGGGCTCAAATCTTCTCATTGACAACAATGGAGTTCTCAAGATTGGAGACTTTGGTCTGGCAACTTTTTTTGAGCCTGATCAAAAGCAGCCTTTAACTAGTCATGTGGTGACGTTGTGGTATAGGCCACCTGAGCTTTTGCTTGGTTCTACCAAGTATGGAGTAGCCATAGATCTTTGGAGCACTGGATGTATACTTGCAGAATTGTTCGCTGGTAAACCGATCATGCCCGGGAGAACAGAGGTTGAACAAATGCATAAAATCTTTAAACTATGTGGTTCGCCATCTGAGGATTATTGGCAAAGAACTAAATTTCCGCATGCAACAAGTTTCAAGCCTCACCGCCCTTATAAGCGACATCTTACTGAGACATTCAGGAATTTCCCTTCTTCAGCTTTAGCTCTTGTTGATAAGCTTCTATCGATTAAGCCAGAGGAACGAGGATCTGCTAATTCGGCTCTTAGGAGCGAGTTTTTCCGAACAGATCCCCTCCCTTGTGACCCTTCAACTTTACCAAAATATCCTCCAAGTAAGGAGTTTGATGCCAAGTGCCGAAATGAAGAAGCAAGAAGGTATTCTCTCTTCGCACACTCGTATATCTTTGAACCAATGTCAACGATAATGAGGCCGAATAATAAGTCCTTATGA | 1497 | 42.75 | MGCICSKESPEPKEVDDNEEAGEFNKTSDQSGTPTPSKREDFVLKIRGSVQNVGLVSFLSRQASQTNGGPVQVRKGKNGSSNDEENKARNNERRRKDHNQKLAKKDVRVNGKLPQMSRIVSLPNGAEGGQVFAGWPSWLTSVAGDAIKGWIPRRADSFEKLDKIGQGTYSSVYRARDLETGKIVALKKVRFVNMDPESVRFMAREICIMRELDHPNVMKLEGLVTSRLSCSLYLVFEYMEHDLAGLVATPGIKFTEPQIKCFMQQLLHGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATFFEPDQKQPLTSHVVTLWYRPPELLLGSTKYGVAIDLWSTGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKFPHATSFKPHRPYKRHLTETFRNFPSSALALVDKLLSIKPEERGSANSALRSEFFRTDPLPCDPSTLPKYPPSKEFDAKCRNEEARRYSLFAHSYIFEPMSTIMRPNNKSL | 498 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2930185 | 2932624 | - | Bda016309.1 | Bda03g00348 | 3607 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00348 | 498 | ProSitePatterns | Protein kinases ATP-binding region signature. | 164 | 187 | IPR017441 | GO:0005524 | |
Bda03g00348 | 498 | MobiDBLite | consensus disorder prediction | 61 | 105 | - | - | |
Bda03g00348 | 498 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 278 | 290 | IPR008271 | GO:0004672|GO:0006468 | |
Bda03g00348 | 498 | Coils | Coil | 81 | 101 | - | - | |
Bda03g00348 | 498 | MobiDBLite | consensus disorder prediction | 9 | 24 | - | - | |
Bda03g00348 | 498 | MobiDBLite | consensus disorder prediction | 78 | 105 | - | - | |
Bda03g00348 | 498 | Pfam | Protein kinase domain | 158 | 442 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g00348 | 498 | SMART | serkin_6 | 158 | 442 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g00348 | 498 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Bda03g00348 | 498 | PANTHER | OS02G0559300 PROTEIN | 68 | 479 | - | - | |
Bda03g00348 | 498 | Gene3D | Phosphorylase Kinase; domain 1 | 145 | 240 | - | - | |
Bda03g00348 | 498 | Gene3D | Transferase(Phosphotransferase) domain 1 | 241 | 480 | - | - | |
Bda03g00348 | 498 | SUPERFAMILY | Protein kinase-like (PK-like) | 152 | 450 | IPR011009 | - | |
Bda03g00348 | 498 | ProSiteProfiles | Protein kinase domain profile. | 158 | 442 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g00348 | 498 | PANTHER | CELL DIVISION PROTEIN KINASE | 68 | 479 | - | - | |
Bda03g00348 | 498 | CDD | STKc_CDK9_like | 158 | 442 | - | - | |
Bda03g00348 | 498 | MobiDBLite | consensus disorder prediction | 61 | 77 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00600 | Bda-Chr2:46856943 | Bda03g00348 | Bda-Chr3:2930185 | 9.34E-122 | dispersed | |
Bda03g00348 | Bda-Chr3:2930185 | Bda10g01151 | Bda-Chr10:45572664 | 0 | dispersed | |
Bda14g01181 | Bda-Chr14:11570470 | Bda03g00348 | Bda-Chr3:2930185 | 6.18E-136 | dispersed | |
Bda14g01184 | Bda-Chr14:11707314 | Bda03g00348 | Bda-Chr3:2930185 | 3.14E-131 | dispersed | |
Bda11g00934 | Bda-Chr11:9121454 | Bda03g00348 | Bda-Chr3:2930185 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69529 | PF00069 | Pkinase | 1.60E-69 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00348 | K08819 | - | csv:101208709 | 681.019 |