Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda03g00382 | ATGGATTGGCCAAAGGATCGTATGCTAATTCAAGTTCTCGATGATTCTGACGATGAAAGCATCCAATGGTTGATCAAGGCAGAGGTTAATCAATGGAGCCAAAAAGGTATCAATATAATCTATAGGCATCGGTTGATAAGAACTGGTTATAAAGCTGGAAATCTCAAGTCTGCAATGAGCTGTGATTATGTCAAAGGCTATGAGTTTGTAGCCATCTTCGATGCCGATTTCCAACCCAATCCCGATTTTCTCAAACAAACAGTACCCCATTTCAAGGACAAACCAGAGCTCGGTTTGGTTCAAGCACGATGGGCATTTGTAAACAAGGACGAGAACTTGTTGACTCGTCTTCAAAACATAAATCTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGCGTTTTTCTTAGTTTCTTTGGCTTCAATGGCACTGCTGGTGTTTGGAGGATCAAAGCACTTGAAGAGTCTGGTGGATGGCTTGAAAGGACGACTGTGGAGGATATGGACATAGCTGTCAGGGCCCATCTCCATGGCTGGAAATTCATTTTTCTTAATGATGTCAAGGTAACTAAACTAAATTCTTGTCTTATCTATTTCTCAAATTCTTGTTTTTTACTCAGAACACTTGATCCAATGCTTCTGTTCTCATCTGTGTTTAAATTTTCAGGTCATTTGTGA | 681 | 40.23 | MDWPKDRMLIQVLDDSDDESIQWLIKAEVNQWSQKGINIIYRHRLIRTGYKAGNLKSAMSCDYVKGYEFVAIFDADFQPNPDFLKQTVPHFKDKPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLSFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVKVTKLNSCLIYFSNSCFLLRTLDPMLLFSSVFKFSGHL | 226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 3178099 | 3178872 | + | Bda016345.1 | Bda03g00382 | 3641 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda03g00382 | 226 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1 | 193 | IPR029044 | - | |
| Bda03g00382 | 226 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 2 | 192 | IPR029044 | - | |
| Bda03g00382 | 226 | Pfam | Glycosyl transferase family group 2 | 70 | 188 | IPR001173 | - | |
| Bda03g00382 | 226 | PANTHER | - | 1 | 190 | - | - | |
| Bda03g00382 | 226 | PANTHER | XYLOGLUCAN GLYCOSYLTRANSFERASE 2-RELATED | 1 | 190 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00382 | Bda-Chr3:3178099 | Bda10g00519 | Bda-Chr10:38817715 | 3.51E-115 | dispersed | |
| Bda11g00885 | Bda-Chr11:8689933 | Bda03g00382 | Bda-Chr3:3178099 | 1.20E-131 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda03g00382 | - | - | qsu:111987347 | 382.104 |