Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00387 ATGGGTAGAAAGAAGCCAATCGCTCGGGAAGACGATAACGCAACTGCCCCGGCTCAGGTAGGAGCTAAGTCCAAGAAGAAGGCGCTTTTAATAGACGACGACGAGTATTCCATTGCAACAGACTTGTCTGAGGTGTCGCAAGTTCAGGAGGAGAAGGCGGTGCCCCTGGGGAATAAAAAGGGTAAAAAGGGTAATGTAAAAGCTTCGCTGCTGAAAGGCGATGAAGAGGATGGTGATTTTGTGCCGGAGATTGTTATCACTGGGAACAAGAAGGGAAAATCGAACAAGGGTGGGGGAAACAGTATGTTTAGTGCATCAAGCTTCGGGTTACTTGAGGAGGAGGAGGAAAACGATGTTGATGTTGAATCTGGAGAGAAGGACGAAGATGAAGAGGGCTATCCGGCTATAAGCTTTTCAGGTAAGAAAAAAGGATCAAAGATTTCTAAGAAAAAAGATAGTTTGTTCAAAGCGTCTTCTGTATTTGATGCCCTTGATGATGAGAATGATGGAGGAACGATTGATAATGAGAGTAGGGTTGAAGAAGATGACGATGAGCCTGTGCCGGTTATTAATTATACGGTAAAGAAGAAGAAGTCATCCAAAGGTGGAAAGACAAGTGGGAGTACGTTTCAAGGTTCAAGTTTTGATGGACTAGACGATGAGGATGAGGATAGGGATGAAAAGATAGATGCGGATGAAGATATTGCTCCAATTAGTTTCTCTGGTAAGAAGAAGAAGTCTTCCAAGGCAACTAAGAAAAATGATATTCTTTTTAGTTCTGCATTTGTTGATGATGCTGGTGATGAGGATCCTTCTGTATCAGAATCAAGTAGAGCAGGTGATGATGTTGTTGAGAATGAGGATGTCTCTGTTACTGCATTTTCAGGTAAGAAGAAGTCTTCAAAGAAGAAAAGGAACAGTGTTTTTGTTTCATTGGATGATGAGAGTAGGCTTGAGAGTGCCAGTGGAGCAGGAGGCGAGCCTGAATTACTGAATGGAGGATCTAGTAATGTTGATGCTGGTACCTCCGTGGCTAATAAGTATGAAGAGGTCACCGAGACTTCAAAAAATAAGAAAAAGAAAAAGAAGAGTGGAAGGACTGCTCAGGAGGAAGATGATTTGGATAAGATTCTTGCAGAACTTGGTGAGGTGCTGCCAGTACCAAAACCTGATGCATCTGCTTCTCTTCCTCCAAAAGAGGATGTTCAGCTTGAACCAACTCTGCCTGTTGATGCTTCCACCGAGAAGGAAGCTGAAGAAGAAAGTATGGAGTCAGCTGCAGCAAAGAAGAAGAAAAAGAAAAAGGAGAAGGAAAAGGAAAAGAAGGCAGCTGCAGTAGCAGCTGCTGCTGAGGAGAAGGGTGAAAAAACCGAAGTACAATCTGAGACCGAACCGAAAAAGGGTGCTGCTAAGAGTAAAGTTCCTGAAAAGAAAGTGCCAAAGCATGTTAGGGAAATGCAGGAAGAAATGGCCAGGAGAAAAGAAGAGGAGGAAAGGAAAAGGAGGGAAGAAGAAGAGAAGTTGAGGAGGGAAGAGGAGGAAAGGCTTAGGCAAGAGGAACTTGAGAGGCAAGCAGAAGAAGCAAAACGAAGGAAAAAGGAAAAAGAAAAGGAGAAGCTTCTGAAGAAGAAATTGGAAGGCAAGCTTTTGACTGGGAAGCAAAAGGAAGAACAGCGTAGGTTACAGGCAATGAAGAACCAATTTCTTGCAAATGGTGTGGGTTTGCCTCTTCCCACAGCAGACTCTGGTGCACCAGGCAAACGGCCCATATACAAGACAAAGAAGACCAAAATGACACAACACCAAGCAAGCAGTAGTCCAACTAAGGTGGTTGAGAACATAGAAGAAATTGAAAATCAGCAAGACACTGTGTTAGATATTGAATTCGTGGAAGGGAAGAACATTGAAGATGCAGAAACAATTAATGTGGATTTGAAATCCGAAATTTCTGAAACTGTCGAAGAGAATGGAATAGTCGAAGAGGATGCGGATGAGGATGAATGGGATGCAAAGAGCTGGGATGATGCTGTTGTTAGTCTATCTATTAAAAGTGCATTTTCCAATGAAGAAGACACTGTATCAGAGCCCATGGTGAAAACAGAGAAAAAGGCTGTACCAACTTCTCGTCATGCAGAAACAATTGTAGGCAGCACACCAGCTCTTTCTGTCAGCCAAAGTTTTTCCTCTAAGGATGTCGAATTTAGAAAAAAGCAGCCTGAGGTGGAAATAGTGGATAATAACAAAATGAAAAATGCTGTTGTTAAGAAAGAAGCACCAAGTTTGGATACTGCTCCTAAAAAGAGTGAAAATAATCTCCGTTCTCCCATTTGCTGCATTATGGGCCATGTTGATACTGGTAAAACCAAGCTTCTGGATTGTATCCGAGGAACTAATGTTCAAGAAGGTGAGGCTGGAGGTATTACCCAACAGATTGGAGCGACTTATTTTCCTGCAGAAAACATACGTGAAAGAACTAGAGAGTTAAAAGCAGATGCAACTTTGAAAGTTCCGGGTCTACTTGTTATTGATACCCCTGGACATGAATCTTTCACGAACCTGCGTTCTCGGGGTTCTGGTTTATGTGATATTGCAATTTTAGTCGTTGACATTATGCATGGTTTAGAGCCACAAACAATAGAATCACTCAATTTATTAAAAATGAGGAACACAGAATTCATTGTTGCACTTAATAAGGTGGATCGACTATACGGGTGGAAAACATGTCGAAATGCACCAATTGTGAAGACAATGAAGCAGCAATCCAAGGACGTGCAGAATGAGTTCAATATGAGGCTCACTCAGATTATTACTCAATTCAAAGAGCAGGGTTTAAATACTGAACTATATTATAAAAATAAAGAAATGGGGGAAACTTTCAGTATAGTACCGACAAGTGCAATAAGTGGTGAAGGCATACCAGATTTGTTATTGTTGCTAGTTCAATGGACTCAGAAAACTATGGTTGAAAAGCTTACTTACAGTGATGAAGTGCAGTGTACAGTGTTGGAGGTCAAGGTGGTTGAAGGCCATGGAACAACCATCGATGTTGTATTAGTTAATGGTGTGCTTCATGAAGGAGACCAAATAGTTGTTTGCGGAATGCAGGGTCCAATTGTTACTTCCATTCGAGCATTATTGACACCCCACCCAATGAAGGAACTCCGAGTTAAGGGCACATATCTCCATCATAAGGAAATTAAGGCTGCCCAGGGGATCAAAATTACGGCCCAGGGCCTTGAGCATGCTATTGCGGGAACTGGTCTTTATGTGGTAGGTCCAAGCGATGACTTGGACGACATCAAAGAATCAGCCATGGAAGATATGAAGTCAGTCTTGAGCAGGATCGACAAGAGTGGCGAAGGGGTTTGTGTGCAAGCATCTACACTGGGTTCTTTGGAAGCATTGTTGGAGTTTTTGAAGTCTCCTGCTGTTAATATTCCTGTCAGTGGAATAAGCATTGGTCCCGTACATAAAAAAGATGTTATGAAGGCCAGTGTGATGCTTGAAAAGAAGAAGGAATATGCCACTATCTTGGCGTTTGATGTCAAAGTGACACCAGAGGCTCGTGAGCTTTCTGATGACCTGGGTGTGAAGATTTTTATTGCTGACATCATTTATCACTTGTTTGATCAGTTTAAGGCTTACATTGACAATATTAAAGAGGAAAAAAAGAAAGAAGCTGCTGATGAAGCTGTATTTCCATGTGTTCTCAAAATTTTAACAAATTGTATTTTCAATAAGAAGGATCCAATCGTTTTGGGGGTGGATGTACTTGAAGGCATTGCCAAGGTTGGAACACCTATTTGTATACCTCAAAGAGAGTTTATTGATATTGGCCGCATCGCATCAATCGAAAACAACCATAAGCCTGTTGATACAGCAAAGAAAGGACAGAAAGTAGCCATTAAGATAGTGGGCTCTTCTCCTGAGGAACAGCAAAAAATGTTTGGTAGGCATTTTGAGCTGGAGGATGAACTTGTTAGTCATATCTCTAGGAAATCGATAGACCTGCTCAAACTCAATTATCGGGATGATTTGTCCATAGAGGAGTGGAGGCTGGTGGTGAAATTGAAGTCCCTTTTCAAGATACAATGA 4095 41.86 MGRKKPIAREDDNATAPAQVGAKSKKKALLIDDDEYSIATDLSEVSQVQEEKAVPLGNKKGKKGNVKASLLKGDEEDGDFVPEIVITGNKKGKSNKGGGNSMFSASSFGLLEEEEENDVDVESGEKDEDEEGYPAISFSGKKKGSKISKKKDSLFKASSVFDALDDENDGGTIDNESRVEEDDDEPVPVINYTVKKKKSSKGGKTSGSTFQGSSFDGLDDEDEDRDEKIDADEDIAPISFSGKKKKSSKATKKNDILFSSAFVDDAGDEDPSVSESSRAGDDVVENEDVSVTAFSGKKKSSKKKRNSVFVSLDDESRLESASGAGGEPELLNGGSSNVDAGTSVANKYEEVTETSKNKKKKKKSGRTAQEEDDLDKILAELGEVLPVPKPDASASLPPKEDVQLEPTLPVDASTEKEAEEESMESAAAKKKKKKKEKEKEKKAAAVAAAAEEKGEKTEVQSETEPKKGAAKSKVPEKKVPKHVREMQEEMARRKEEEERKRREEEEKLRREEEERLRQEELERQAEEAKRRKKEKEKEKLLKKKLEGKLLTGKQKEEQRRLQAMKNQFLANGVGLPLPTADSGAPGKRPIYKTKKTKMTQHQASSSPTKVVENIEEIENQQDTVLDIEFVEGKNIEDAETINVDLKSEISETVEENGIVEEDADEDEWDAKSWDDAVVSLSIKSAFSNEEDTVSEPMVKTEKKAVPTSRHAETIVGSTPALSVSQSFSSKDVEFRKKQPEVEIVDNNKMKNAVVKKEAPSLDTAPKKSENNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADATLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKTMKQQSKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTGLYVVGPSDDLDDIKESAMEDMKSVLSRIDKSGEGVCVQASTLGSLEALLEFLKSPAVNIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELSDDLGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKILTNCIFNKKDPIVLGVDVLEGIAKVGTPICIPQREFIDIGRIASIENNHKPVDTAKKGQKVAIKIVGSSPEEQQKMFGRHFELEDELVSHISRKSIDLLKLNYRDDLSIEEWRLVVKLKSLFKIQ 1364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3205293 3212132 - Bda016351.1 Bda03g00387 3646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00387 1364 MobiDBLite consensus disorder prediction 93 107 - -
Bda03g00387 1364 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1364 IPR015760 -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 88 151 - -
Bda03g00387 1364 Gene3D - 766 994 IPR027417 -
Bda03g00387 1364 Gene3D Translation factors 995 1113 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 335 350 - -
Bda03g00387 1364 Pfam Elongation factor Tu domain 2 1011 1086 IPR004161 GO:0005525
Bda03g00387 1364 Pfam Elongation factor Tu GTP binding domain 776 984 IPR000795 GO:0003924|GO:0005525
Bda03g00387 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 767 1063 IPR027417 -
Bda03g00387 1364 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1364 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 1 23 - -
Bda03g00387 1364 Gene3D Translation factors 1227 1364 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 271 285 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 364 379 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 164 538 - -
Bda03g00387 1364 CDD aeIF5B_II 996 1106 - -
Bda03g00387 1364 Coils Coil 416 453 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 216 230 - -
Bda03g00387 1364 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 772 988 IPR000795 GO:0003924|GO:0005525
Bda03g00387 1364 MobiDBLite consensus disorder prediction 439 538 - -
Bda03g00387 1364 CDD IF2_aeIF5B_IV 1235 1330 - -
Bda03g00387 1364 CDD IF2_eIF5B 775 985 - -
Bda03g00387 1364 Coils Coil 483 545 - -
Bda03g00387 1364 SUPERFAMILY Translation proteins 1231 1363 IPR009000 -
Bda03g00387 1364 TIGRFAM small_GTP: small GTP-binding protein domain 777 901 IPR005225 GO:0005525
Bda03g00387 1364 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1097 1226 IPR036925 -
Bda03g00387 1364 PRINTS GTP-binding elongation factor signature 892 901 IPR000795 GO:0003924|GO:0005525
Bda03g00387 1364 PRINTS GTP-binding elongation factor signature 856 867 IPR000795 GO:0003924|GO:0005525
Bda03g00387 1364 PRINTS GTP-binding elongation factor signature 776 789 IPR000795 GO:0003924|GO:0005525
Bda03g00387 1364 PRINTS GTP-binding elongation factor signature 840 850 IPR000795 GO:0003924|GO:0005525
Bda03g00387 1364 MobiDBLite consensus disorder prediction 111 129 - -
Bda03g00387 1364 Gene3D - 1114 1220 IPR036925 -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 596 612 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 573 612 - -
Bda03g00387 1364 Pfam Translation-initiation factor 2 1101 1213 IPR023115 -
Bda03g00387 1364 Coils Coil 635 655 - -
Bda03g00387 1364 MobiDBLite consensus disorder prediction 412 431 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00387 Bda-Chr3:3205293 Bda04g01114 Bda-Chr4:62013424 1.34E-34 dispersed
Bda11g00879 Bda-Chr11:8630351 Bda03g00387 Bda-Chr3:3205293 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00387 K03243 - csin:114291147 1476.46