Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda03g00393 | ATGGCGTCATCGAGCTCGATTAATTCGGATCCACTGCGACGCTCTTCTTCTTCTTCTTCTTCTTCCTCCGCTAGAAAAAGGAAAGCTCAATCTGACCAGAGCAAGCGGAACGGCAATCTTTATCCGAATCAGAACCATAATTTCGCCTCTATGACCGTTGATGGCCTCCTTCGCAATGTCTATGACTCCAATCCTACGGCTAAGTCCACTCTCCTGGACGCTCAGATAACCTTAGAGGACACCTCTTGCCCGGAAAACGCCTCTCTCGCTATCAATGACGATCCTAATGTCTCTTCAAATGGACTCAAAACTGTGGATGATGTGTGGAGAGACATTGTATCAGGAACTCGGAAAGAGTTGAAAGAGGAGTGCCCTGACGATATGATGACGCTGGAGGATTTCCTAGCCAAAGCCGGCGCCGTTGACAGTGTCGACGTGAAGGTGTCGCCAACTGAGAGGTTGAGCGGAGGGATGTTTGCGTTTGATGACATCACTCCTAGTCCACTTCAATCGCTGGATAAAGTTGAGGGGGCTATTGTTGCTTATGGAAACGGAATCGATGTGTTTGGCAGTGGAGGAAGTGGGAGATTGAGGAGAGGTAGGTCTGTTATAGAACCATTAGACAAGGCCGCTGAGCAAAGGCAAAAAAGGATGATCAAGAACAGGGAGTCAGCAGCGAGGTCAAGGGAAAGGAAGCAGGCCTATCAAGCTGAGTTAGAGTCTTTGGCTGTGAGACTAGAGGAAGAAAACGAGCAACTGTTGAAGGAAAAGGCTGAGAGGACAAAAGAAAGATATAAGGAGTTGATGGAGAAAATAATCCCAATTGTGGAGAAGCGAAGGCCACCTCGTGTTCTTAGGAGGGTTCGATCCTTGGAGTGGTAG | 882 | 48.3 | MASSSSINSDPLRRSSSSSSSSSARKRKAQSDQSKRNGNLYPNQNHNFASMTVDGLLRNVYDSNPTAKSTLLDAQITLEDTSCPENASLAINDDPNVSSNGLKTVDDVWRDIVSGTRKELKEECPDDMMTLEDFLAKAGAVDSVDVKVSPTERLSGGMFAFDDITPSPLQSLDKVEGAIVAYGNGIDVFGSGGSGRLRRGRSVIEPLDKAAEQRQKRMIKNRESAARSRERKQAYQAELESLAVRLEEENEQLLKEKAERTKERYKELMEKIIPIVEKRRPPRVLRRVRSLEW | 293 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 3243371 | 3245883 | - | Bda016356.1 | Bda03g00393 | 3652 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda03g00393 | 293 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 216 | 231 | IPR004827 | GO:0003700|GO:0006355 | |
| Bda03g00393 | 293 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 211 | 263 | IPR004827 | GO:0003700|GO:0006355 | |
| Bda03g00393 | 293 | CDD | bZIP_plant_BZIP46 | 213 | 259 | - | - | |
| Bda03g00393 | 293 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 4 | 292 | IPR043452 | GO:0003700|GO:0045893 | |
| Bda03g00393 | 293 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Bda03g00393 | 293 | SUPERFAMILY | Leucine zipper domain | 214 | 264 | IPR046347 | GO:0003700|GO:0006355 | |
| Bda03g00393 | 293 | Coils | Coil | 225 | 271 | - | - | |
| Bda03g00393 | 293 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Bda03g00393 | 293 | Pfam | bZIP transcription factor | 211 | 269 | IPR004827 | GO:0003700|GO:0006355 | |
| Bda03g00393 | 293 | SMART | brlzneu | 209 | 271 | IPR004827 | GO:0003700|GO:0006355 | |
| Bda03g00393 | 293 | Gene3D | - | 211 | 270 | - | - | |
| Bda03g00393 | 293 | PANTHER | BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR | 4 | 292 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda03g00393 | Bda11g00872 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00393 | Bda-Chr3:3243371 | Bda15g00035 | Bda-Chr15:1807030 | 7.62E-13 | dispersed | |
| Bda11g00872 | Bda-Chr11:8586249 | Bda03g00393 | Bda-Chr3:3243371 | 6.30E-130 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 15647 | PF00170 | bZIP_1 | 1.80E-12 | CL0018 | Bda | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda03g00393 | K14432 | - | zju:107421670 | 337.421 |