Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00411 GTTTTTCCATTTAGATCTGCGGTTGTTCTTCACTTTATTCAGATGGAGCAGGGCCAGGTTTCGAATCTGGTTTTTATCTGCTTGATCTTGCTGCTTCGTCCGCTATGGCTGATTTCTGCTAACATGGAAGGTGATGCTTTGCACAGCCTAAGAACCAGCTTGCAGGATCCCAACAATGTACTTCAGAGTTGGGATCCTACCCTTGTTAATCCCTGCACTTGGTTTCATGTTACATGCAACAATGATAATAGTGTTATACGAGTTGATCTTGGAAATGCAGCTTTATCCGGTCAACTTGTTCCACAGCTTGGCCTATTAAAAAACTTGCAGTATCTGGAACTCTACAGTAATAACATCAGCGGAATAATTCCTACTGACCTTGGGAATCTGACTAGTTTGGTGAGCTTGGATCTTTACTTGAATAATTTTACTGGTCCTATTCCTGAGACATTGGGCAAGCTGTCGAAATTGCGATTCCTTCGGCTTAACAACAACAGCTTGTCTGGTTCTATTCCAATGTCATTGACTAATATTTCATCCCTTCAAGTTTTGGATCTCTCCAACAATCATCTTTCAGGAGTGGTTCCAGACAATGGTTCCTTCTCCTTGTTCACTCCTATCAGTTTTGCTAACAATTTGGATCTATGTGGTCCTGTTACTGGACATCCCTGTCCAGGATCTCCTCCATTTTCTCCTCCTCCGCCATTTGTTCCACCTACCCCAATTTCTACTCCAGGAGGAAATAGTGCAACTGGGGCTATTGCAGGTGGAGTTGCTGCAGGTGCAGCCTTACTTTTTGCTGCTCCTGCAATTGCATTTGCATGGTGGCGTCGAAGGAAGCCTCAAGAATATTTCTTTGATGTACCAGCTGAGGAGGATCCTGAAGTACATCTTGGACAGCTTAAAAGGTTCTCTTTGCGAGAATTACAAGTTGCCACTGATAGTTTTAGCAACAAAAACATTCTTGGTAGGGGTGGATTTGGTAAAGTTTACAAAGGCCGCTTAGCAGATGGTTCCCTTGTAGCTGTGAAAAGATTAAAAGAAGAACGCACACCTGGTGGAGAACTGCAATTTCAAACTGAAGTAGAGATGATTAGCATGGCTGTTCATCGAAATCTCCTTCGCTTACGTGGATTTTGTATGACGCCAACTGAGCGTCTACTTGTATATCCCTACATGGCAAATGGAAGTGTTGCTTCATGTTTAAGAGAACGCCCGCCATCTCAACCACCTTTAGATTGGCAAACAAGGAAGCACATTGCATTGGGATCTGCAAGAGGACTTTCTTATTTACATGATCACTGCGACCCTAAGATCATTCATCGTGATGTGAAAGCTGCAAATATATTACTGGATGAGGAGTTTGAGGCTGTTGTTGGAGACTTTGGACTGGCTAAACTTATGGACTACAAGGATACTCATGTCACAACTGCTGTTCGTGGCACAATTGGTCATATTGCTCCAGAATACCTTTCAACTGGCAAATCTTCTGAGAAGACTGATGTATTTGGGTATGGAATCATGCTTCTGGAGCTAATTACTGGTCAGAGGGCTTTTGATCTTGCACGGCTTGCAAATGACGATGATGTTATGTTACTTGATTGGGTGAAAGGACTTCTGAAAGAAAAAAAGCTAGAAATGCTGGTTGATCCTGATCTCCAAAACAAGTACATAGAATCAGAGGTGGAGCAGCTAATCCAGGTTGCCTTGCTCTGCACACAAGGTTCACCGATGGATCGACCCAAGATGTCAGAAGTGGTAAGAATGCTTGAGGGAGATGGGTTGGCCGAGAAATGGGACGAGTGGCAAAAGATTGAAGTTCTCCGGCAAGAGGTTGAACTTGCTCCTCATCCGAATTCCGATTGGATTGTTGACTCCACTGACAATCTACACGCATTTGAGCTCTCCGGTCCAAGA 1917 43.66 VFPFRSAVVLHFIQMEQGQVSNLVFICLILLLRPLWLISANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLKNLQYLELYSNNISGIIPTDLGNLTSLVSLDLYLNNFTGPIPETLGKLSKLRFLRLNNNSLSGSIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPTPISTPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWQTRKHIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNKYIESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAEKWDEWQKIEVLRQEVELAPHPNSDWIVDSTDNLHAFELSGPR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3543626 3554332 - Bda033487 Bda03g00411 3670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00411 639 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 22 639 IPR031048 GO:0004675|GO:0005102|GO:0006468
Bda03g00411 639 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 22 639 - -
Bda03g00411 639 SMART LRR_typ_2 154 177 IPR003591 -
Bda03g00411 639 SMART LRR_typ_2 106 129 IPR003591 -
Bda03g00411 639 SMART LRR_typ_2 130 153 IPR003591 -
Bda03g00411 639 SMART LRR_typ_2 178 203 IPR003591 -
Bda03g00411 639 SUPERFAMILY Protein kinase-like (PK-like) 295 591 IPR011009 -
Bda03g00411 639 Gene3D Phosphorylase Kinase; domain 1 285 392 - -
Bda03g00411 639 Gene3D Ribonuclease Inhibitor 39 226 IPR032675 -
Bda03g00411 639 Pfam Protein kinase domain 317 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00411 639 ProSiteProfiles Protein kinase domain profile. 316 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00411 639 SUPERFAMILY L domain-like 44 205 - -
Bda03g00411 639 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Bda03g00411 639 Gene3D Transferase(Phosphotransferase) domain 1 393 610 - -
Bda03g00411 639 SMART serkin_6 316 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00411 639 Pfam Leucine Rich Repeat 180 197 IPR001611 GO:0005515
Bda03g00411 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Bda03g00411 639 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00411 Bda11g00853 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02214 Bda-Chr1:57998963 Bda03g00411 Bda-Chr3:3543626 3.27E-175 dispersed
Bda03g00411 Bda-Chr3:3543626 Bda07g01052 Bda-Chr7:12392324 4.41E-169 dispersed
Bda08g00448 Bda-Chr8:4605115 Bda03g00411 Bda-Chr3:3543626 3.00E-104 dispersed
Bda01g02111 Bda-Chr1:57168550 Bda03g00411 Bda-Chr3:3543626 0 transposed
Bda06g01102 Bda-Chr6:39196892 Bda03g00411 Bda-Chr3:3543626 0 transposed
Bda09g00911 Bda-Chr9:25761206 Bda03g00411 Bda-Chr3:3543626 0 transposed
Bda13g00252 Bda-Chr13:3193202 Bda03g00411 Bda-Chr3:3543626 0 transposed
Bda14g00923 Bda-Chr14:7308713 Bda03g00411 Bda-Chr3:3543626 1.29E-32 transposed
Bda14g01141 Bda-Chr14:10578947 Bda03g00411 Bda-Chr3:3543626 5.54E-85 transposed
Bda11g00853 Bda-Chr11:8396251 Bda03g00411 Bda-Chr3:3543626 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69531 PF00069 Pkinase 5.50E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00411 K13418 - csv:101208695 1098.96