Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00411 | GTTTTTCCATTTAGATCTGCGGTTGTTCTTCACTTTATTCAGATGGAGCAGGGCCAGGTTTCGAATCTGGTTTTTATCTGCTTGATCTTGCTGCTTCGTCCGCTATGGCTGATTTCTGCTAACATGGAAGGTGATGCTTTGCACAGCCTAAGAACCAGCTTGCAGGATCCCAACAATGTACTTCAGAGTTGGGATCCTACCCTTGTTAATCCCTGCACTTGGTTTCATGTTACATGCAACAATGATAATAGTGTTATACGAGTTGATCTTGGAAATGCAGCTTTATCCGGTCAACTTGTTCCACAGCTTGGCCTATTAAAAAACTTGCAGTATCTGGAACTCTACAGTAATAACATCAGCGGAATAATTCCTACTGACCTTGGGAATCTGACTAGTTTGGTGAGCTTGGATCTTTACTTGAATAATTTTACTGGTCCTATTCCTGAGACATTGGGCAAGCTGTCGAAATTGCGATTCCTTCGGCTTAACAACAACAGCTTGTCTGGTTCTATTCCAATGTCATTGACTAATATTTCATCCCTTCAAGTTTTGGATCTCTCCAACAATCATCTTTCAGGAGTGGTTCCAGACAATGGTTCCTTCTCCTTGTTCACTCCTATCAGTTTTGCTAACAATTTGGATCTATGTGGTCCTGTTACTGGACATCCCTGTCCAGGATCTCCTCCATTTTCTCCTCCTCCGCCATTTGTTCCACCTACCCCAATTTCTACTCCAGGAGGAAATAGTGCAACTGGGGCTATTGCAGGTGGAGTTGCTGCAGGTGCAGCCTTACTTTTTGCTGCTCCTGCAATTGCATTTGCATGGTGGCGTCGAAGGAAGCCTCAAGAATATTTCTTTGATGTACCAGCTGAGGAGGATCCTGAAGTACATCTTGGACAGCTTAAAAGGTTCTCTTTGCGAGAATTACAAGTTGCCACTGATAGTTTTAGCAACAAAAACATTCTTGGTAGGGGTGGATTTGGTAAAGTTTACAAAGGCCGCTTAGCAGATGGTTCCCTTGTAGCTGTGAAAAGATTAAAAGAAGAACGCACACCTGGTGGAGAACTGCAATTTCAAACTGAAGTAGAGATGATTAGCATGGCTGTTCATCGAAATCTCCTTCGCTTACGTGGATTTTGTATGACGCCAACTGAGCGTCTACTTGTATATCCCTACATGGCAAATGGAAGTGTTGCTTCATGTTTAAGAGAACGCCCGCCATCTCAACCACCTTTAGATTGGCAAACAAGGAAGCACATTGCATTGGGATCTGCAAGAGGACTTTCTTATTTACATGATCACTGCGACCCTAAGATCATTCATCGTGATGTGAAAGCTGCAAATATATTACTGGATGAGGAGTTTGAGGCTGTTGTTGGAGACTTTGGACTGGCTAAACTTATGGACTACAAGGATACTCATGTCACAACTGCTGTTCGTGGCACAATTGGTCATATTGCTCCAGAATACCTTTCAACTGGCAAATCTTCTGAGAAGACTGATGTATTTGGGTATGGAATCATGCTTCTGGAGCTAATTACTGGTCAGAGGGCTTTTGATCTTGCACGGCTTGCAAATGACGATGATGTTATGTTACTTGATTGGGTGAAAGGACTTCTGAAAGAAAAAAAGCTAGAAATGCTGGTTGATCCTGATCTCCAAAACAAGTACATAGAATCAGAGGTGGAGCAGCTAATCCAGGTTGCCTTGCTCTGCACACAAGGTTCACCGATGGATCGACCCAAGATGTCAGAAGTGGTAAGAATGCTTGAGGGAGATGGGTTGGCCGAGAAATGGGACGAGTGGCAAAAGATTGAAGTTCTCCGGCAAGAGGTTGAACTTGCTCCTCATCCGAATTCCGATTGGATTGTTGACTCCACTGACAATCTACACGCATTTGAGCTCTCCGGTCCAAGA | 1917 | 43.66 | VFPFRSAVVLHFIQMEQGQVSNLVFICLILLLRPLWLISANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLKNLQYLELYSNNISGIIPTDLGNLTSLVSLDLYLNNFTGPIPETLGKLSKLRFLRLNNNSLSGSIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPTPISTPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWQTRKHIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNKYIESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAEKWDEWQKIEVLRQEVELAPHPNSDWIVDSTDNLHAFELSGPR | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3543626 | 3554332 | - | Bda033487 | Bda03g00411 | 3670 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00411 | 639 | PANTHER | LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED | 22 | 639 | IPR031048 | GO:0004675|GO:0005102|GO:0006468 | |
Bda03g00411 | 639 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 22 | 639 | - | - | |
Bda03g00411 | 639 | SMART | LRR_typ_2 | 154 | 177 | IPR003591 | - | |
Bda03g00411 | 639 | SMART | LRR_typ_2 | 106 | 129 | IPR003591 | - | |
Bda03g00411 | 639 | SMART | LRR_typ_2 | 130 | 153 | IPR003591 | - | |
Bda03g00411 | 639 | SMART | LRR_typ_2 | 178 | 203 | IPR003591 | - | |
Bda03g00411 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 295 | 591 | IPR011009 | - | |
Bda03g00411 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 392 | - | - | |
Bda03g00411 | 639 | Gene3D | Ribonuclease Inhibitor | 39 | 226 | IPR032675 | - | |
Bda03g00411 | 639 | Pfam | Protein kinase domain | 317 | 588 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g00411 | 639 | ProSiteProfiles | Protein kinase domain profile. | 316 | 603 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g00411 | 639 | SUPERFAMILY | L domain-like | 44 | 205 | - | - | |
Bda03g00411 | 639 | ProSitePatterns | Protein kinases ATP-binding region signature. | 322 | 344 | IPR017441 | GO:0005524 | |
Bda03g00411 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 393 | 610 | - | - | |
Bda03g00411 | 639 | SMART | serkin_6 | 316 | 590 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g00411 | 639 | Pfam | Leucine Rich Repeat | 180 | 197 | IPR001611 | GO:0005515 | |
Bda03g00411 | 639 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 439 | 451 | IPR008271 | GO:0004672|GO:0006468 | |
Bda03g00411 | 639 | Pfam | Leucine rich repeat N-terminal domain | 40 | 80 | IPR013210 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g00411 | Bda11g00853 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02214 | Bda-Chr1:57998963 | Bda03g00411 | Bda-Chr3:3543626 | 3.27E-175 | dispersed | |
Bda03g00411 | Bda-Chr3:3543626 | Bda07g01052 | Bda-Chr7:12392324 | 4.41E-169 | dispersed | |
Bda08g00448 | Bda-Chr8:4605115 | Bda03g00411 | Bda-Chr3:3543626 | 3.00E-104 | dispersed | |
Bda01g02111 | Bda-Chr1:57168550 | Bda03g00411 | Bda-Chr3:3543626 | 0 | transposed | |
Bda06g01102 | Bda-Chr6:39196892 | Bda03g00411 | Bda-Chr3:3543626 | 0 | transposed | |
Bda09g00911 | Bda-Chr9:25761206 | Bda03g00411 | Bda-Chr3:3543626 | 0 | transposed | |
Bda13g00252 | Bda-Chr13:3193202 | Bda03g00411 | Bda-Chr3:3543626 | 0 | transposed | |
Bda14g00923 | Bda-Chr14:7308713 | Bda03g00411 | Bda-Chr3:3543626 | 1.29E-32 | transposed | |
Bda14g01141 | Bda-Chr14:10578947 | Bda03g00411 | Bda-Chr3:3543626 | 5.54E-85 | transposed | |
Bda11g00853 | Bda-Chr11:8396251 | Bda03g00411 | Bda-Chr3:3543626 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69531 | PF00069 | Pkinase | 5.50E-45 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00411 | K13418 | - | csv:101208695 | 1098.96 |