Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00445 ATGACTTCTTTGATTCGGTTGAGTGTTGGAAATAATAAGTTTGATGGAACTCCCTTTCCGATTGAGGTGGTTACTCTCGAAAAGCTGAATTGGCTTTATATGAATAACTGTTCAATCGAAGGCCAGATTCCTCCGTCCATCGGAAACCTCACTCAACTCATTAATTTAGAGCTCTCACACAATCTTCTGACCGGGAATATTCCGGCGGAGATCGGAAAACTCAGGAATCTCTGGCAACTAGAACTTTTCAATAACCGGTTGAACGGTACTCTTCCAGTTGGTTTGAGAAACCTCACGGTCCTTGAGAACTTTGACGCTTCGATGAACAATCTTGAAGGAGATCTTTCTGAGTTGAGTTTTTTGAATAATCTTGTTTCTCTGCAACTCTACAAGAATAGTTTCACCGGTGAAATTCCGGCGGAGTTTGGCGAATTCAAGCGGCTCATAAAGCTTTCGCTGTACAGGAATCAGTTGACCGGTCCTCTTCCTCAAACGCTGGGTTCTTGGACTGAATTCAATTTCATTGACGTGTCTGAAAATTTGTTGACGGGCCAAATTCCGGCTGATATGTGCAAAAGAGGGACGATGAAGCAGCTCCTCATGCTTCAGAACAATTTCACGGGAAAAATTCCGGACTCCTACGCTAATTGCTCTTCGTTGCTTAGATTTAGGGTGAGCAACAATTCCCTTTCCGGCGTGGTCCCTGCCGGAATTTGGGGATTACCGAACGTCAATATCATCGACGTCGGGTTGAACCAATTAGAGGGTCCAATTACTTCCGACATCCGTAACGCAGGGGCTCTCTGGCAATTGTACGTCGGAAACAATCGTTTCTCCGGCCATTTACCAGCGGAGATTTCGAAAGCATCATCCCTAGTTACGATTGACCTTAGCTATAATCAGTTTTCAGGAGAAATTCCTGCGACAATTGGCAAACTATGGCGCTTAGGAAGTATTCTTTTGCATAGCAATATGTTTTCAGGCCCAATTCCATCCACAATAGGTTCCTGTCGCTCCCTCAGTGATTTAAATCTTGCTCAAAATTCTCTTACCGGTGAAATTCCATCGTCTTTAGGAATTTTACCCGCTTTATACTCTCTGAATTTATCCCGAAACAAACTTACCGGTGAAATCCCCCGGAGTTTGTCATCACTGAAGCTAAGCCTGTTAGATCTGTCAAACAATCAATTAACAGGTTCGATACCGGATCCTCTATCCATCGAAGCGTACAACAATAGTTTCGCCGGGAATCCTGGCCTCTGCAGTGTCGCCGTTCGCTATGTTCAGAGATGTTCCTCCAGTTTCGGAATATCTACCGACGCTCGAATGATGGTCATATGCTTTGCGGTAGGTTTAGGGCTTTTGCTGCTTTTCCTGACATTCTTGGTCTACTTGAATAAGAAAGAGAGATTCAGAGACCGATCGTTGAAAGAAAAATCTTGGAACGTAAAGTCCTTCCATATCTTAACATTCACCGAGGAAGAGATTCTCGACGCCATTAAAGAGGAGAATCTAATTGGAAAAGGCGGTTCAGGAAACGTGTACAAAGTCAAAGTCGATGACGGAAAAGAACTAGCCGTCAAACACATCACAAACACCGACCAACACGGCCGGGAAAAGAACCCATCAGCGGCGCCGATGGTCGGAAAACGGTCAGGAAAATCACGGCAATTCGATGCAGAGGTGGATACCTTGAGCTCCATCAGACATCTGAACGTGGTAAAGCTGTATTGCAGCATTACGAGCGAGGATTCGAGCTTGCTGGTGTATGAATATATGCCGAATGGAAGCTTGTGGGATAAGCTTCATACGAGCCAGAAAATGGATTTGGATTGGGAAACGAGGTATGAAATTGCAGTGGGAGCTGCAAAGGGATTGGAGTATTTGCACCATGGGTGTGAGCAGCCAGTTCTTCACAGAGACGTGAAATCTAGCAATATTTTGTTGGATGAAAACCTTAGACCCAGAATTGCTGATTTTGGGCTGGCCAAGATTGTTCAGACCAGGGGAGGTAATGATTCCACCCGTGTCATTGCCGGAACGCTGGGCTACATCGCTCCAGAATATGCATATTCGTCGAAAGCAACTACGAAATGCGATGTTTACAGCTTCGGAGTGGTGTTAATGGAGCTGGTAAGTGGGAAGAAGCCAGTGGAGGAGGAGTTCGGGGAGAATAAGAATATAGTAGGCTGGATTTCGAATAAGGTGGAAACCAAGGAGGGAGCAATGCAGGTTTTGGACAAGAGTTTATTAGGGTTTTGGGGAGAAGACGAAATGATTCAGGCTCTGAAAATCGCCATTAAAGCGACCTCCAAGAATCCTTCTCTCCGTCCCTCCATGAAAGAAGTGGTTCAGCTGCTGATCGAGGCAGACCCTTCTAGGAACAGTAGAAAGACCAAGGACGACGCCTCCAATGGATCCAAAATCAAGAACCATGTCGAATTCTGA 2448 45.34 MTSLIRLSVGNNKFDGTPFPIEVVTLEKLNWLYMNNCSIEGQIPPSIGNLTQLINLELSHNLLTGNIPAEIGKLRNLWQLELFNNRLNGTLPVGLRNLTVLENFDASMNNLEGDLSELSFLNNLVSLQLYKNSFTGEIPAEFGEFKRLIKLSLYRNQLTGPLPQTLGSWTEFNFIDVSENLLTGQIPADMCKRGTMKQLLMLQNNFTGKIPDSYANCSSLLRFRVSNNSLSGVVPAGIWGLPNVNIIDVGLNQLEGPITSDIRNAGALWQLYVGNNRFSGHLPAEISKASSLVTIDLSYNQFSGEIPATIGKLWRLGSILLHSNMFSGPIPSTIGSCRSLSDLNLAQNSLTGEIPSSLGILPALYSLNLSRNKLTGEIPRSLSSLKLSLLDLSNNQLTGSIPDPLSIEAYNNSFAGNPGLCSVAVRYVQRCSSSFGISTDARMMVICFAVGLGLLLLFLTFLVYLNKKERFRDRSLKEKSWNVKSFHILTFTEEEILDAIKEENLIGKGGSGNVYKVKVDDGKELAVKHITNTDQHGREKNPSAAPMVGKRSGKSRQFDAEVDTLSSIRHLNVVKLYCSITSEDSSLLVYEYMPNGSLWDKLHTSQKMDLDWETRYEIAVGAAKGLEYLHHGCEQPVLHRDVKSSNILLDENLRPRIADFGLAKIVQTRGGNDSTRVIAGTLGYIAPEYAYSSKATTKCDVYSFGVVLMELVSGKKPVEEEFGENKNIVGWISNKVETKEGAMQVLDKSLLGFWGEDEMIQALKIAIKATSKNPSLRPSMKEVVQLLIEADPSRNSRKTKDDASNGSKIKNHVEF 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3813730 3821004 - Bda016413.2 Bda03g00445 3704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00445 815 Gene3D Transferase(Phosphotransferase) domain 1 593 813 - -
Bda03g00445 815 SUPERFAMILY L domain-like 197 405 - -
Bda03g00445 815 Gene3D Ribonuclease Inhibitor 199 433 IPR032675 -
Bda03g00445 815 Gene3D Ribonuclease Inhibitor 1 198 IPR032675 -
Bda03g00445 815 Gene3D Phosphorylase Kinase; domain 1 483 592 - -
Bda03g00445 815 Pfam Leucine rich repeat 338 397 IPR001611 GO:0005515
Bda03g00445 815 MobiDBLite consensus disorder prediction 793 815 - -
Bda03g00445 815 MobiDBLite consensus disorder prediction 791 815 - -
Bda03g00445 815 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 1 799 - -
Bda03g00445 815 SUPERFAMILY L domain-like 2 243 - -
Bda03g00445 815 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Bda03g00445 815 Pfam Protein kinase domain 502 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00445 815 SMART serkin_6 500 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00445 815 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 799 - -
Bda03g00445 815 ProSiteProfiles Protein kinase domain profile. 500 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00445 815 MobiDBLite consensus disorder prediction 531 555 - -
Bda03g00445 815 SUPERFAMILY Protein kinase-like (PK-like) 486 787 IPR011009 -
Bda03g00445 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00445 Bda13g01341 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00445 Bda-Chr3:3813730 Bda10g00028 Bda-Chr10:508517 4.39E-38 dispersed
Bda13g01453 Bda-Chr13:37251958 Bda03g00445 Bda-Chr3:3813730 2.33E-18 transposed
Bda13g01341 Bda-Chr13:35721352 Bda03g00445 Bda-Chr3:3813730 1.90E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69533 PF00069 Pkinase 2.00E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00445 - - cpap:110807830 1059.67