Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00448 ATGTTCACTCAACGGGTGAGATTACGGCTACAAGGTCGTCATGTGGTGATGGATAATGGCATATTGCAAGTAACATTATCTAACCCGGAGGGAATTGTTACTGGAATACAGTATAATGGTGTTGACAATCTGCTTGAAATTCTTAACAAAGAATCAAATAGAGGGTATTGGGACCTTGTTTGGAGCGCACCAGGAGGCAAGGGAATATTTGATGTGGTGGTTGTAGAAAATGAAGAACAGGTGGAACTCTCATTTACGAGAATGTGGGAGCCTTCTCTTGCGGGCAAGGTTGTTCCTTTAAATATTGACAAAAGGTTTATCATGCTACGCGGTTCCTCGGGGTTTTATTCCTATGGAATTTATGAGCACTTAAAGCAGTGGCCTGATTTTGACCTTGGGGAAACCAGAATCGCGTTCAAACTCAGAAAAGACAAGTTTCAGTACATGGCAGTAGCAGACAACAGGCAAAGATTCATGCCTCTGCCTGATGACCGGCTATTCCAAGATGCCAAACATTAG 519 42.97 MFTQRVRLRLQGRHVVMDNGILQVTLSNPEGIVTGIQYNGVDNLLEILNKESNRGYWDLVWSAPGGKGIFDVVVVENEEQVELSFTRMWEPSLAGKVVPLNIDKRFIMLRGSSGFYSYGIYEHLKQWPDFDLGETRIAFKLRKDKFQYMAVADNRQRFMPLPDDRLFQDAKH 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3841403 3843007 + Bda016416.1 Bda03g00448 3707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00448 172 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 166 - -
Bda03g00448 172 Pfam Rhamnogalacturonate lyase family 11 168 IPR010325 -
Bda03g00448 172 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00448 Bda-Chr3:3841403 Bda13g01367 Bda-Chr13:36229677 8.82E-72 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00448 K18195 - zju:107421364 283.108