Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00452 ATGGATTGGCTCGAGATCTCGTGGGATGATTTGCATATCAAAGAGCGTGTTGGAGCTGGCTCGTTCGGTACAGTGCATCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACTGTGCAAGATTTCCAGGATGATCAGTTGAAGGAGTTTTTAAGAGAGGTAGCAATAATGAAGCGAGTTCGCCATCCAAATGTGGTTCTCTTTATGGGTGCAGTAACTAAGCGCCCTCATCTGTCCATAGTGACTGAATATCTGCCAAGGGGTAGTCTATATCGCCTGATCCATAGATCAGCTTCTGGTGAAATACTGGACCAGAGGAGACGGTTGCGCATGGCATTGGATGTGGCCAAGGGAATCAATTATCTACACTCCCTTTCTCCTCCTATAGTTCATTGGGATCTTAAATCTCCAAATTTGTTGGTAGACAAGAATTGGACTGTGAAGGTGTGCGATTTTGGCTTGTCCAGATTCAAAGCAAACACTTTTATATCGTCAAAGTCGGTAGCTGGAACACCTGAGTGGATGGCTCCCGAATTCCTTCGGGGTGAGCCCTCAAATGAAAAATCTGATGTATACAGTTTTGGTGTGATTCTTTGGGAGCTTGTTACGATGCAACAACCCTGGAATGAACTCGGTCCTGCACAAGTTGTTGGAGCTGTCGCTTTTCAAAAAAGAAGACTTACCATCCCTCATAACACATCCCCGTTGTTAGCTTCACTTATCGAAACTTGCTGGGCTGATGATCCTATTCACCGCCCGTCTTTCAGAAGCATAGTGGACTCACTAAAGAAGCTACTCAAGTCTCCGCAGCAGTTGATAGTGTGA 834 45.68 MDWLEISWDDLHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRSASGEILDQRRRLRMALDVAKGINYLHSLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNELGPAQVVGAVAFQKRRLTIPHNTSPLLASLIETCWADDPIHRPSFRSIVDSLKKLLKSPQQLIV 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3929099 3931979 + Bda016420.1 Bda03g00452 3711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00452 277 PIRSF ILK 2 275 - -
Bda03g00452 277 Pfam Protein tyrosine and serine/threonine kinase 11 265 IPR001245 GO:0004672|GO:0006468
Bda03g00452 277 CDD STKc_MAP3K-like 17 265 - -
Bda03g00452 277 ProSiteProfiles Protein kinase domain profile. 11 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00452 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Bda03g00452 277 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 276 - -
Bda03g00452 277 ProSitePatterns Protein kinases ATP-binding region signature. 17 38 IPR017441 GO:0005524
Bda03g00452 277 SMART serkin_6 11 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00452 277 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 276 - -
Bda03g00452 277 PRINTS Tyrosine kinase catalytic domain signature 85 98 IPR001245 GO:0004672|GO:0006468
Bda03g00452 277 PRINTS Tyrosine kinase catalytic domain signature 236 258 IPR001245 GO:0004672|GO:0006468
Bda03g00452 277 PRINTS Tyrosine kinase catalytic domain signature 173 183 IPR001245 GO:0004672|GO:0006468
Bda03g00452 277 PRINTS Tyrosine kinase catalytic domain signature 126 144 IPR001245 GO:0004672|GO:0006468
Bda03g00452 277 PRINTS Tyrosine kinase catalytic domain signature 192 214 IPR001245 GO:0004672|GO:0006468
Bda03g00452 277 Gene3D Phosphorylase Kinase; domain 1 4 88 - -
Bda03g00452 277 Gene3D Transferase(Phosphotransferase) domain 1 90 275 - -
Bda03g00452 277 SUPERFAMILY Protein kinase-like (PK-like) 3 264 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00452 Bda11g00804 CCT
Bda03g00452 Bda11g00804 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00452 Bda-Chr3:3929099 Bda11g01805 Bda-Chr11:53078072 8.78E-117 dispersed
Bda15g00444 Bda-Chr15:7493005 Bda03g00452 Bda-Chr3:3929099 8.62E-38 dispersed
Bda11g00804 Bda-Chr11:7975647 Bda03g00452 Bda-Chr3:3929099 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69534 PF07714 PK_Tyr_Ser-Thr 3.40E-66 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00452 - - csv:101204522 520.776