Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00486 ATGACGGTTACATCCACAGCTCGCGAAGAGAATGTTTACTTGGCTAAGCTCGCGGAGCAAGCTGAGCGATACGATGAGATGGTGGAGTTTATGGAGAAGGTTTCCACAGCTGGAGAGAGCGACGAACTCACCGTCGAGGAGCGGAATCTCCTCTCCGTGGCTTATAAGAACGTGATCGGAGCTCGTAGAGCGTCGTGGCGCATTGTCTCGTCTATCGAGCAGAAGGAAGAAAGTCGGGGTAACGATAAACATGTTTCCATCATACGCGATTACAGATCCAAGATTGAGAACGAGCTGTCCGAAATCTGCGATGGGATCCTCAAGCTCCTCGACTCCCGCCTTATTCCGTCCGCTTCAGCTGGAGATTCCAAGGTCTTTTTCCTGAAAATGAAGGGCGATTATAACAGGTACCTTGCGGAATTCAAGACCGGAGCTGAGCGGAAGGAGGTTGCTGAGAGTACCCTCACTGCTTACAAATCTGCTCAGATTTCCAGCTCATATGAATTGCACCTTAAGAACAAATATATTATCAAATGTTATTTCTTCAACGCAGTTCTTCATTTGCAGGATATTTCTAACTCAGAATTAGCTCCAACTCATCCTATCCGACTTGGTCTGGCTCTGAATTTCTCCGTGTTTTACTATGAGATTCTAAACTCTCCAGATCGTGCTTGCAGTCTTGCTAAACAGCGTCCTAAGAGTTGCATTATCTTCTGTATCAACCAGGCTTTTGATGAAGCAATTGCTGAATTGGATTCACTGGGTGAGGAATCATACAAGGATAGTACTCTAATCATGCAGCTTCTTCGTGATAACCTCACTATATGGACGTCTGACATGCAGGTGTGA 849 46.05 MTVTSTAREENVYLAKLAEQAERYDEMVEFMEKVSTAGESDELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNDKHVSIIRDYRSKIENELSEICDGILKLLDSRLIPSASAGDSKVFFLKMKGDYNRYLAEFKTGAERKEVAESTLTAYKSAQISSSYELHLKNKYIIKCYFFNAVLHLQDISNSELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQRPKSCIIFCINQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTIWTSDMQV 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4165513 4166729 - Bda016455.1 Bda03g00486 3745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00486 282 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bda03g00486 282 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bda03g00486 282 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bda03g00486 282 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 4 169 - -
Bda03g00486 282 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bda03g00486 282 PANTHER 14-3-3 PROTEIN 4 169 IPR000308 -
Bda03g00486 282 PANTHER 14-3-3 PROTEIN 187 281 IPR000308 -
Bda03g00486 282 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 187 281 - -
Bda03g00486 282 Coils Coil 14 34 - -
Bda03g00486 282 PIRSF 2014/3/3 2 177 IPR000308 -
Bda03g00486 282 PIRSF 2014/3/3 182 282 IPR000308 -
Bda03g00486 282 Pfam 14-3-3 protein 14 174 IPR023410 -
Bda03g00486 282 Pfam 14-3-3 protein 190 277 IPR023410 -
Bda03g00486 282 Gene3D - 1 282 IPR036815 -
Bda03g00486 282 SMART 1433_4 8 281 IPR023410 -
Bda03g00486 282 SUPERFAMILY 14-3-3 protein 8 279 IPR036815 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00486 Bda13g01393 CCT
Bda01g00893 Bda03g00486 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00486 Bda-Chr3:4165513 Bda13g01393 Bda-Chr13:36620851 6.37E-153 dispersed
Bda01g00893 Bda-Chr1:41914948 Bda03g00486 Bda-Chr3:4165513 3.99E-153 wgd
Bda11g00775 Bda-Chr11:7779739 Bda03g00486 Bda-Chr3:4165513 8.48E-106 wgd
Bda13g01389 Bda-Chr13:36548803 Bda03g00486 Bda-Chr3:4165513 1.91E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00486 K06630 - csin:114283877 408.297