Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00498 | ATGGCAGGTGCAATGGATCTACACAGTTTTACAGCTTCTCTATCAGATCCCTATGGAGGTGAGCTAATGGAAGCTCTTGGACCTTATATCAAAAGTGCTTCTTCTCCTCCATCTACCTCTTTTTCTTCTTCTCCTTTTACTTCTCTTCCTCAAAACTGTTTCTCTTTCTCCCCTTCCCTCCCATCAATGGACTTTTTCGATACAAATGGTTGCTCTGGTTCGACGAACTCTGTAGTTTTAGACGAGTTCTCAACCCAACCTTTTCTTAATTTGGAGCAGCCATGGCCAATTGGCCTAAACCAACTTACCCCATCTCAGATCTACCAGATCCAAGCTCAGATCCAGCAGAATTACTCTCCATATCTTGATTTCGAACGGACCCACCAGCATATATACTCCAGTCATAGTAAGCTAAACTTCCTTGGTCCGAAACGCATTGAAATGAAGCAAGTGGGTTCCCCATTAAAGCCGACGAAGCTTTACAGAGGAGTTAGACAGAGGCACTGGGGGAAATGGGTAGCTGAGATTCGTCTCCCGAGGAATCGAACTCGGCTATGGCTTGGCACCTTCGATACGGCAATAGAAGCCGCGTTAGCTTACGACCAAGCTGCTTACAAGCTCAGAGGCGATTTCGCGAGGCTTAATTTTCCAAATCTGAAGCACAAAGGCGAATTAGGCGAGTATAAGCCTCTCCATTCCTCCATTGATGCGAAGCTCCAAGCAATTTGCCAAAGCTTGGCTGAATCGCAGAAACAGGGGAAAACAGAGAAGCCTCGCACTGCCAGAAAAGCGCAAAAGGTCCAAGTGCAGCCGCCGGTGGACGAAGTGCAGTCGAAAGAAACAGAGATCAACAATCAGGTGGGAAACTCCCCGTCGCCGGCGATAACAGACAGCGACGGGTCAGCAGGATCTTCACCTTTGTCAGATCTGACGTTTCCGGACATAACAGAGTCCCCATGGGAGCAGTTTGCGGAGAATTTCGCGTTGCAGAAATACCCTTCTGAGATTGATTGGGCAGCCATCCTATCTTCCTAA | 1035 | 47.83 | MAGAMDLHSFTASLSDPYGGELMEALGPYIKSASSPPSTSFSSSPFTSLPQNCFSFSPSLPSMDFFDTNGCSGSTNSVVLDEFSTQPFLNLEQPWPIGLNQLTPSQIYQIQAQIQQNYSPYLDFERTHQHIYSSHSKLNFLGPKRIEMKQVGSPLKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAIEAALAYDQAAYKLRGDFARLNFPNLKHKGELGEYKPLHSSIDAKLQAICQSLAESQKQGKTEKPRTARKAQKVQVQPPVDEVQSKETEINNQVGNSPSPAITDSDGSAGSSPLSDLTFPDITESPWEQFAENFALQKYPSEIDWAAILSS | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4235216 | 4236250 | - | Bda016467.1 | Bda03g00498 | 3757 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00498 | 344 | PRINTS | Ethylene responsive element binding protein signature | 161 | 172 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00498 | 344 | PRINTS | Ethylene responsive element binding protein signature | 183 | 199 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00498 | 344 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 | 1 | 340 | - | - | |
Bda03g00498 | 344 | Gene3D | AP2/ERF domain | 160 | 218 | IPR036955 | GO:0003700|GO:0006355 | |
Bda03g00498 | 344 | CDD | AP2 | 159 | 219 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00498 | 344 | Pfam | AP2 domain | 161 | 209 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00498 | 344 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 1 | 340 | - | - | |
Bda03g00498 | 344 | ProSiteProfiles | AP2/ERF domain profile. | 160 | 217 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00498 | 344 | SUPERFAMILY | DNA-binding domain | 160 | 217 | IPR016177 | GO:0003677 | |
Bda03g00498 | 344 | MobiDBLite | consensus disorder prediction | 249 | 315 | - | - | |
Bda03g00498 | 344 | SMART | rav1_2 | 160 | 223 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00498 | 344 | MobiDBLite | consensus disorder prediction | 271 | 312 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00877 | Bda03g00498 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00498 | Bda-Chr3:4235216 | Bda14g00749 | Bda-Chr14:5720143 | 6.28E-32 | dispersed | |
Bda06g00142 | Bda-Chr6:2132460 | Bda03g00498 | Bda-Chr3:4235216 | 6.87E-27 | dispersed | |
Bda07g00459 | Bda-Chr7:5906577 | Bda03g00498 | Bda-Chr3:4235216 | 1.64E-26 | dispersed | |
Bda15g00305 | Bda-Chr15:5872633 | Bda03g00498 | Bda-Chr3:4235216 | 1.80E-24 | dispersed | |
Bda10g00094 | Bda-Chr10:2231249 | Bda03g00498 | Bda-Chr3:4235216 | 2.89E-69 | transposed | |
Bda01g00877 | Bda-Chr1:41669531 | Bda03g00498 | Bda-Chr3:4235216 | 4.79E-73 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15657 | PF00847 | AP2 | 8.50E-15 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00498 | K09286 | - | twl:120009478 | 344.354 |