Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00504 ATGTTCGACAGACAGGAAACGGGAGAGATGGATAGTAGAAGTTTGTCGGCTTCTCGCGATCAACTACAAAACGAGACGTTCATTCATAAAGTGGGAATTCCACCCAAGCAAAACCTCTTCAAGGAATTCAAGAGCAATTTCAAAGAAACATTTTTCGCAGACGATCCTCTTCGATCTTTCAAGGATCAAACCAAGTCTCGAAAGTTAATCTTAGGCATTCAAGCTGTTTTTCCTATTCTCGAGTGGGGACGACGTTACAATTCATCTAAATTTAGAGGGGATCTCATTGCTGGACTGACCATTGCAAGTCTCTGCATTCCTCAGGATATTGGGTATGCAAAGCTGGCCAATTTGGCTCCTCAGTATGGGCTGTACTCGAGCTTTGTTCCGCCATTGATATATGCTTTCATGGGTAGCTCAAGAGATATAGCCATTGGACCAGTGGCCGTTGTTTCTCTCTTGTTAGGGACTCTTCTTCAAGCCGAGATCGATCCCATTACAAACACGGTCGAGTATTTGCGACTTGCATTTACGGCTACATTTTTCGCCGGAATCACTCAAGCCTCCCTCGGAATTTTGAGGTTGGGATTCTTGATCGACTTCTTATCTCACGCTGCCATCGTCGGATTTATGGGTGGAGCTGCCATTACCATAGCTCTTCAACAGCTCAAGGGATTTCTTGGCATAAAAAAATTCACAAAGAAAACAGATATAATCTCCGTTATGCACTCCGTTTTCGCCTCAGCCCGCCATGGATGGAACTTGGAGACCATAGCCATTGGAGCAAGTTTTTTAACTTTTCTCCTCTTTGCAAAATACATTGGAAAGAAAAACAAGAAACTTTTCTGGGTACCTGCAATTACTCCTCTGATATCTGTTGTTCTATCCACTGCTTTAGTTTACATTACTCATGCAGAAAAGAAAGGGGTTCAAATTGTGAAACACATAGAGAAAGGAATAAATCCAATATCAGTTGATCAAATATACTTTTCGGGCGATTACCTCATCAAAGGTTTTAGGATCGGGGTCGTTGCCGGAATGATTGCTCTGACGGAAGCCATTGCAATAGGAAGAACATTTGCTGGGATGAAAGACTACCAAATTGATGGAAACAGAGAAATGGTTGCTCTAGGAACTATGAACATCGTTGGCTCGATGACTTCCTGCTACGTCGCTACTGGTTCATTTTCTCGCTCGGCTGTGAATTACATGGCCGGCTGTCGAACTGCAGTTTCCAACATTGTGATGTCAGTTGTTGTGTTCCTGACTTTGCTGTTTATCACTCCTCTTTTCAAATACACTCCAAACGCCATTCTTGCCGCCATCATTATATCGGCTGTGATCAACCTGATCGACTTTCAGGCTGCGATTTTGATATGGAAGATTGATAAATTTGATTTTGTGGCTTGCATGGGAGCTTTCTTTGGTGTTGTTTTCACCTCTGTCGAAATCGGCCTTCTGATTGCTGTCTCTATTTCCTTTGCTAAAATCCTCTTACAAGTTACACGGCCAAGGACTGCACTTCTCGGCAAAATTCCTCGGACGACGGTGTACAGAAACATCCTACAGTATCCCGATGCGACTCAGGTTCCTGGCGTTTTGATTGTTCGAGTCGATTCTGCAATTTACTTTTCCAACTCAAATTACATCAAAGAAAGGCTACTGAGATGGTTGACAGATGAACAAGAACAAATAAAGAAATCTCACCAACCAAAAATCAAGTTTTTGGTAGTTGAAATGTCACCTGTTACTGACATTGACACCAGTGGAATCCATGCTTTGGAAGAGTTATATAGGAGTCTCCAAAAGAGAGAAGTTCAGCTTGTTCTGGCAAATCCTGGGTCGGCAGTGGTAGACAAGCTTTATTCGTCCGGTTTCGATCGTTTGATCGGCCACGACAACATCTTCCTCACCGTTGCCCAGGCCATCTCAGCCTGTTCTCCAAAATTGGTAGAAGAAGCTTGA 1965 43.21 MFDRQETGEMDSRSLSASRDQLQNETFIHKVGIPPKQNLFKEFKSNFKETFFADDPLRSFKDQTKSRKLILGIQAVFPILEWGRRYNSSKFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLQAEIDPITNTVEYLRLAFTATFFAGITQASLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMHSVFASARHGWNLETIAIGASFLTFLLFAKYIGKKNKKLFWVPAITPLISVVLSTALVYITHAEKKGVQIVKHIEKGINPISVDQIYFSGDYLIKGFRIGVVAGMIALTEAIAIGRTFAGMKDYQIDGNREMVALGTMNIVGSMTSCYVATGSFSRSAVNYMAGCRTAVSNIVMSVVVFLTLLFITPLFKYTPNAILAAIIISAVINLIDFQAAILIWKIDKFDFVACMGAFFGVVFTSVEIGLLIAVSISFAKILLQVTRPRTALLGKIPRTTVYRNILQYPDATQVPGVLIVRVDSAIYFSNSNYIKERLLRWLTDEQEQIKKSHQPKIKFLVVEMSPVTDIDTSGIHALEELYRSLQKREVQLVLANPGSAVVDKLYSSGFDRLIGHDNIFLTVAQAISACSPKLVEEA 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4272633 4275591 - Bda016473.1 Bda03g00504 3763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00504 654 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 2 11 653 - -
Bda03g00504 654 TIGRFAM sulP: sulfate permease 78 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda03g00504 654 Gene3D STAS domain 503 649 IPR036513 -
Bda03g00504 654 PANTHER SULFATE TRANSPORTER 11 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda03g00504 654 Pfam Sulfate permease family 91 471 IPR011547 GO:0016021
Bda03g00504 654 ProSiteProfiles STAS domain profile. 523 646 IPR002645 -
Bda03g00504 654 SUPERFAMILY SpoIIaa-like 525 647 IPR036513 -
Bda03g00504 654 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Bda03g00504 654 Pfam STAS domain 524 642 IPR002645 -
Bda03g00504 654 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01404 Bda-Chr1:49943944 Bda03g00504 Bda-Chr3:4272633 1.24E-30 dispersed
Bda03g00504 Bda-Chr3:4272633 Bda14g01473 Bda-Chr14:21453367 0 dispersed
Bda03g00504 Bda-Chr3:4272633 Bda03g00872 Bda-Chr3:7564021 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00504 K17470 - jre:108997232 1070.46