Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00515 ATGGGTTCGATAGACGCACCGACGAGCGCAGGCAACGGCTCTTCCCCTGTCCAATTCGACGCCGACCAAAACCCCTCTTCCGGCGACGTCACTGCCAATTCTGCGACCATGCCGGTGAGGCCGCCGGAGTTTGGTGGCATAACGAGGCGGAGAGCGTCTATGCTTCCCCTCGAGGTTGGTACTCGAGTCTTGTGCCGTTGGAGGGACGGGAAATTCCATCCTGTCAAGGTCATTGAGCGTAGAAAATTGGTTATTGATGGCTGCAATGATTATGAGTATTACGTCCATTATACTGAGTTCAATAGGAGGCTTGATGAATGGGTGAAGCTTGAACAGCTTGATCTTGAGTCAGTTGAATCTGCCGTTGATGAAAAAGTAGAAGAAAAGGTAACGAGCTTGAAAATGACACGCCACCAGAAGCGGAAAATTGATGAGACACATGTGGAGGGTCACGAGGAACTTGATGCTGCCAGCTTACGAGAGCATGAAGAATTCACGAAAGTGAAAAATATTGCAACCATAGAGCTTGGAAGATATGAGATTGAGACGTGGTACTTCTCCCCATTTCCACCAGAATACAATGACTGCGTAAAGCTCTACTTTTGTGAGTTTTGCCTCAATTTTATGAAGCGTAAAGAACAGCTTCAGAGGCATATGAGGAAGTGTGATCTCAAGCATCCCCCTGGTGATGAAATTTATCGTTGTGGTACATTATCTATGTTTGAGGTCGATGGTAAAAAAAACAAGGTGTATGGGCAGAATCTCTGTTACTTGGCAAAGTTGTTTCTTGATCACAAGACTCTTTATTACGATGTTGACCTTTTTCTCTTTTATGTTCTTTGTGAATGTGATGATAGAGGATGCCACATGGTTGGATATTTTTCCAAGTCATCGTTGTTTTTTTTGGTGCAGGAAAAGCATTCTGAGGAGTCTTATAATTTGGCATGTATATTAACTCTTCCACCTTATCAGAGGAAAGGCTATGGAAAATTCTTAATTGCCTTCTCGTATGAACTGTCCAAGAAAGAATGCAAAGTCGGTACACCTGAGCGACCACTTTCAGATCTCGGGCTGGTGAGCTACAGAGGGTACTGGACTCGGGTTCTTTTAGACATATTGAAGAAACACAAGGCCAATATCTCTATTAAGGAACTTAGTGACATGACGGCTATTAAGGCAGATGATATACTGAACACCCTTCAGAGCCTAGATTTAATTCAATACCGCAAAGGACAGCATGTCATCTGTGCAGATCCTAAGGTGTTGGACCGCCATCTGAAAGCGGCTGGTCGGGGAGGTCTCGATGTTGACGTCAGCAAATTGATCTGGACTCCTTACAAGGAGCAAGGTTGA 1353 44.72 MGSIDAPTSAGNGSSPVQFDADQNPSSGDVTANSATMPVRPPEFGGITRRRASMLPLEVGTRVLCRWRDGKFHPVKVIERRKLVIDGCNDYEYYVHYTEFNRRLDEWVKLEQLDLESVESAVDEKVEEKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCVKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKSSLFFLVQEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKECKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKELSDMTAIKADDILNTLQSLDLIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQG 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4337601 4343526 - Bda016484.1 Bda03g00515 3774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00515 450 MobiDBLite consensus disorder prediction 1 47 - -
Bda03g00515 450 PANTHER HISTONE ACETYLTRANSFERASE 11 449 - -
Bda03g00515 450 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 166 445 IPR002717 GO:0004402|GO:0006355|GO:0016573
Bda03g00515 450 Pfam MOZ/SAS family 227 412 IPR002717 GO:0004402|GO:0006355|GO:0016573
Bda03g00515 450 Gene3D - 225 445 - -
Bda03g00515 450 Gene3D - 353 433 IPR036388 -
Bda03g00515 450 SMART chromo_7 71 130 IPR000953 -
Bda03g00515 450 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 167 446 IPR016181 -
Bda03g00515 450 Pfam RNA binding activity-knot of a chromodomain 57 115 IPR025995 -
Bda03g00515 450 CDD CBD_MOF_like 60 129 - -
Bda03g00515 450 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 11 449 - -
Bda03g00515 450 SUPERFAMILY Chromo domain-like 49 167 IPR016197 -
Bda03g00515 450 Gene3D - 167 223 - -
Bda03g00515 450 Gene3D - 48 166 - -
Bda03g00515 450 MobiDBLite consensus disorder prediction 1 34 - -
Bda03g00515 450 Pfam MYST family zinc finger domain 168 222 IPR040706 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00515 Bda11g00749 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00515 Bda-Chr3:4337601 Bda11g00751 Bda-Chr11:7523437 3.44E-55 dispersed
Bda11g00749 Bda-Chr11:7511472 Bda03g00515 Bda-Chr3:4337601 1.77E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00515 K11308 - pvy:116131553 789.645