Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00523 | ATGCCTGCAACAATGGCGAAGGCCAGAAACCAGAGAAATCCCACCAAAATTGTTCAAAAAAATGAAAACTACCCACCCCAGAAGGCAGAAAAGCCGCCACCTTGGTCGGTGGTTAGGGGGCTATTGAGCTGTAGATATCTCCAACCCCAACCACAATCTCTACAAATGGTGAGAAAAGAGCAGCAGAAGCTCAAACTAGAAACATCCATGGAGGAGAATGGCAAGAAATGCAAGAAAATGAGATGGTCCGGCTCACTTTGTAGCAACACGAAGATAGTGCAAAGGCATGATCAAACTGGGTTTCCTCAGGTCCATAAGAATAGGACTTCTTTTAACGCAGGAAACGATGACTACTCTTCGAGTAGATCCATGAAAGCTCCTCTCCGTGAACTCAATGGGGTCGCCATGTCTGCCTTTTCTTCTTCTTCTTTATCTGCATCCTCAAACTCCTCCAACGGTGGCTCTTCTAGATCGGGGAAGTCTTTCAGAAAATTCTATGGCTGTTATGAGTGTAAGATGGTCGTTGATCCTGTTCTTGGAGTCATTAGAGATCCTTCTCTCAGAAATACTATTTTTCCTTGTCCTGAATGTCGTGAAATCTTCAACAAAGCTGAAAGTTTGGAGCTTCATAAATCCATCAGCCACGCAGTGACTGAACTGGGTTCTGAGGATACAAGCAGGAACGTGGTAGAAATCATATTCCAGTCAAGCTGGCTAAAGAAACAAGCCCCTGTTTGCAAAATCGACCGAATACTCAAAGTCCACAACTCCCAAAAGACAATCTGCAAATTCGAGGAGTACAGAGACGCCATTAAAGCCAAATCAACAAAGCTTCCAAAGAAGCACCCACGCTGCATAGCTGACGGCAATGAGCTCCTTAGATTCCACTGCACCACTTTGGCCTGCGCGCTCGGCCAAAACGGGTCATCCAATCTCTGTAACGCAATCACCCGCTGCAGCGTCTGCAGCATCATAAAGAACGGCTTCAAAGTGTCGCCGGAAGAGGGAGTTCTGACGACAGCGACGAGTGGGAAAGCCCACGACAGTGCAGGAGCTACGCCGGACGGTGAGGGGCGGCGGGCGATGCTGGTTTGCCGGGTGATTGCGGGGAGAGTAAGGAGGAGCTCGGAAATGAGTAGGGAAGAGTACGATTCGGTGGGAGGTGCAGTGGAAGTGTATTCCAATTTGGAAGAGTTGCGCGTCTTCAATCCAAATGCTATTCTGCCTTGTTTTGTCGTCATCTATGGAGGATTTTAG | 1257 | 47.89 | MPATMAKARNQRNPTKIVQKNENYPPQKAEKPPPWSVVRGLLSCRYLQPQPQSLQMVRKEQQKLKLETSMEENGKKCKKMRWSGSLCSNTKIVQRHDQTGFPQVHKNRTSFNAGNDDYSSSRSMKAPLRELNGVAMSAFSSSSLSASSNSSNGGSSRSGKSFRKFYGCYECKMVVDPVLGVIRDPSLRNTIFPCPECREIFNKAESLELHKSISHAVTELGSEDTSRNVVEIIFQSSWLKKQAPVCKIDRILKVHNSQKTICKFEEYRDAIKAKSTKLPKKHPRCIADGNELLRFHCTTLACALGQNGSSNLCNAITRCSVCSIIKNGFKVSPEEGVLTTATSGKAHDSAGATPDGEGRRAMLVCRVIAGRVRRSSEMSREEYDSVGGAVEVYSNLEELRVFNPNAILPCFVVIYGGF | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4373738 | 4375085 | + | Bda016492.1 | Bda03g00523 | 3782 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00523 | 418 | MobiDBLite | consensus disorder prediction | 103 | 122 | - | - | |
Bda03g00523 | 418 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 35 | 415 | - | - | |
Bda03g00523 | 418 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 192 | 220 | IPR013087 | - | |
Bda03g00523 | 418 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 35 | 415 | - | - | |
Bda03g00523 | 418 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Bda03g00523 | 418 | SUPERFAMILY | ADP-ribosylation | 217 | 416 | - | - | |
Bda03g00523 | 418 | MobiDBLite | consensus disorder prediction | 8 | 22 | - | - | |
Bda03g00523 | 418 | Gene3D | - | 215 | 416 | - | - | |
Bda03g00523 | 418 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 194 | 215 | IPR013087 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01412 | Bda03g00523 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00290 | Bda-Chr3:2522305 | Bda03g00523 | Bda-Chr3:4373738 | 3.59E-103 | dispersed | |
Bda03g00523 | Bda-Chr3:4373738 | Bda08g01222 | Bda-Chr8:50076592 | 5.49E-103 | dispersed | |
Bda09g00083 | Bda-Chr9:1592455 | Bda03g00523 | Bda-Chr3:4373738 | 9.91E-38 | transposed | |
Bda09g00094 | Bda-Chr9:1809077 | Bda03g00523 | Bda-Chr3:4373738 | 1.50E-37 | transposed | |
Bda01g01412 | Bda-Chr1:50041254 | Bda03g00523 | Bda-Chr3:4373738 | 1.23E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15659 | None | None | None | None | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00523 | - | - | zju:107421015 | 530.02 |