Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00523 ATGCCTGCAACAATGGCGAAGGCCAGAAACCAGAGAAATCCCACCAAAATTGTTCAAAAAAATGAAAACTACCCACCCCAGAAGGCAGAAAAGCCGCCACCTTGGTCGGTGGTTAGGGGGCTATTGAGCTGTAGATATCTCCAACCCCAACCACAATCTCTACAAATGGTGAGAAAAGAGCAGCAGAAGCTCAAACTAGAAACATCCATGGAGGAGAATGGCAAGAAATGCAAGAAAATGAGATGGTCCGGCTCACTTTGTAGCAACACGAAGATAGTGCAAAGGCATGATCAAACTGGGTTTCCTCAGGTCCATAAGAATAGGACTTCTTTTAACGCAGGAAACGATGACTACTCTTCGAGTAGATCCATGAAAGCTCCTCTCCGTGAACTCAATGGGGTCGCCATGTCTGCCTTTTCTTCTTCTTCTTTATCTGCATCCTCAAACTCCTCCAACGGTGGCTCTTCTAGATCGGGGAAGTCTTTCAGAAAATTCTATGGCTGTTATGAGTGTAAGATGGTCGTTGATCCTGTTCTTGGAGTCATTAGAGATCCTTCTCTCAGAAATACTATTTTTCCTTGTCCTGAATGTCGTGAAATCTTCAACAAAGCTGAAAGTTTGGAGCTTCATAAATCCATCAGCCACGCAGTGACTGAACTGGGTTCTGAGGATACAAGCAGGAACGTGGTAGAAATCATATTCCAGTCAAGCTGGCTAAAGAAACAAGCCCCTGTTTGCAAAATCGACCGAATACTCAAAGTCCACAACTCCCAAAAGACAATCTGCAAATTCGAGGAGTACAGAGACGCCATTAAAGCCAAATCAACAAAGCTTCCAAAGAAGCACCCACGCTGCATAGCTGACGGCAATGAGCTCCTTAGATTCCACTGCACCACTTTGGCCTGCGCGCTCGGCCAAAACGGGTCATCCAATCTCTGTAACGCAATCACCCGCTGCAGCGTCTGCAGCATCATAAAGAACGGCTTCAAAGTGTCGCCGGAAGAGGGAGTTCTGACGACAGCGACGAGTGGGAAAGCCCACGACAGTGCAGGAGCTACGCCGGACGGTGAGGGGCGGCGGGCGATGCTGGTTTGCCGGGTGATTGCGGGGAGAGTAAGGAGGAGCTCGGAAATGAGTAGGGAAGAGTACGATTCGGTGGGAGGTGCAGTGGAAGTGTATTCCAATTTGGAAGAGTTGCGCGTCTTCAATCCAAATGCTATTCTGCCTTGTTTTGTCGTCATCTATGGAGGATTTTAG 1257 47.89 MPATMAKARNQRNPTKIVQKNENYPPQKAEKPPPWSVVRGLLSCRYLQPQPQSLQMVRKEQQKLKLETSMEENGKKCKKMRWSGSLCSNTKIVQRHDQTGFPQVHKNRTSFNAGNDDYSSSRSMKAPLRELNGVAMSAFSSSSLSASSNSSNGGSSRSGKSFRKFYGCYECKMVVDPVLGVIRDPSLRNTIFPCPECREIFNKAESLELHKSISHAVTELGSEDTSRNVVEIIFQSSWLKKQAPVCKIDRILKVHNSQKTICKFEEYRDAIKAKSTKLPKKHPRCIADGNELLRFHCTTLACALGQNGSSNLCNAITRCSVCSIIKNGFKVSPEEGVLTTATSGKAHDSAGATPDGEGRRAMLVCRVIAGRVRRSSEMSREEYDSVGGAVEVYSNLEELRVFNPNAILPCFVVIYGGF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4373738 4375085 + Bda016492.1 Bda03g00523 3782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00523 418 MobiDBLite consensus disorder prediction 103 122 - -
Bda03g00523 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 415 - -
Bda03g00523 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 220 IPR013087 -
Bda03g00523 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 415 - -
Bda03g00523 418 MobiDBLite consensus disorder prediction 1 33 - -
Bda03g00523 418 SUPERFAMILY ADP-ribosylation 217 416 - -
Bda03g00523 418 MobiDBLite consensus disorder prediction 8 22 - -
Bda03g00523 418 Gene3D - 215 416 - -
Bda03g00523 418 ProSitePatterns Zinc finger C2H2 type domain signature. 194 215 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01412 Bda03g00523 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00290 Bda-Chr3:2522305 Bda03g00523 Bda-Chr3:4373738 3.59E-103 dispersed
Bda03g00523 Bda-Chr3:4373738 Bda08g01222 Bda-Chr8:50076592 5.49E-103 dispersed
Bda09g00083 Bda-Chr9:1592455 Bda03g00523 Bda-Chr3:4373738 9.91E-38 transposed
Bda09g00094 Bda-Chr9:1809077 Bda03g00523 Bda-Chr3:4373738 1.50E-37 transposed
Bda01g01412 Bda-Chr1:50041254 Bda03g00523 Bda-Chr3:4373738 1.23E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15659 None None None None Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00523 - - zju:107421015 530.02