Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00533 ATAGAGATGGAGAATTCAGTGCTGACCAAGCTAAAACCTTACTTGGCCATGGTTTCCGTCCAGTTTGGTTACGCCGGAATGAACATCATCACCATGCTTTCTTTCAAGCATGGCATGAGCCATTACATTCTGGCCGTATATCGTCACGCTATCGCCACCCTCGTCATTGCCCCTTTCGCCATCTATTTCGAGAGGAAAACACGACCAAAGATGACTTTGCCCGTCTTTTTAAGGATAATGCTTCTTGCTTTCCTCGAGCCTGTGCTTGATCAAAACCTTTACTACGTGGGAATGAAGTATACTTCGGCAACCTTTGCATCTGCTATTGTCAATGTTCTTCCCGCCGTGACTTTCATCATGGCAATCACTTTCAGGCTGGAGAGTGTGAACTTGAAGAAAATAGAGAGCATAGCGAAGGTCGGCGGAACGGTAGTGACCGTGACAGGAGCCATGATAATGACGATGTACAAAGGGCCTCTCGTCGATATCATACACGGGAATGGCCCGGTTGGAGTCCACCATGCTGCCTCTAATCAATCGAATTCCGACCAACACTGGGTCACTGGTACTCTCATGCTCTTGTGCAGTTGCTGCGGCTGGGCTGCCTTCTTCATCTTGCAATCGTTCACGTTAAAGAAGTACCCGGCGGAGCTATCGTTAAGTGGGTGGATATGCCTGATGGGGACGGTGGAAGGAGCGGCGGTGTCGCTCGCGATGGAACGAGACATGAGCGCTTGGGTTTTAGGTTGGGATTCGAGGCTTCTGGCAGCTGCTTACACAGGAGTGGTTTGCTCTGGCATTGCATATTACCTACAGGGAGTGGTGATCAAAGAGAAAGGCCCTGTTTTTGTGACCTCTTTCAGCCCTCTAATCATGATCATCACAGCTGCTCTGGGTGCCATCATTTTAGCCGAGAAAATCCACGTAGGAAGCATAATTGGAGCCATTCTGATAGTCGTGGGGCTGTACACAGTCGTGTGGGGCAAAAGCAAGGACCAGCAAAACAGCAGAAAGATAACAGAGGGCGATGAGAGTGACGTTCAGCTGCCCATCACTTGCACCGGCAAATCTGCCTCGCCTTACTGCAATCACGTCGACGCCGTCTCAAAGCCCGCTGCTCTCGCCTCCCACTTGTGA 1137 50.4 IEMENSVLTKLKPYLAMVSVQFGYAGMNIITMLSFKHGMSHYILAVYRHAIATLVIAPFAIYFERKTRPKMTLPVFLRIMLLAFLEPVLDQNLYYVGMKYTSATFASAIVNVLPAVTFIMAITFRLESVNLKKIESIAKVGGTVVTVTGAMIMTMYKGPLVDIIHGNGPVGVHHAASNQSNSDQHWVTGTLMLLCSCCGWAAFFILQSFTLKKYPAELSLSGWICLMGTVEGAAVSLAMERDMSAWVLGWDSRLLAAAYTGVVCSGIAYYLQGVVIKEKGPVFVTSFSPLIMIITAALGAIILAEKIHVGSIIGAILIVVGLYTVVWGKSKDQQNSRKITEGDESDVQLPITCTGKSASPYCNHVDAVSKPAALASHL 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4434334 4436050 + Bda016503.1 Bda03g00533 3792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00533 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 152 - -
Bda03g00533 378 PANTHER WAT1-RELATED PROTEIN 9 345 IPR030184 GO:0016021|GO:0022857
Bda03g00533 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 331 - -
Bda03g00533 378 PANTHER WAT1-RELATED PROTEIN 9 345 - -
Bda03g00533 378 Pfam EamA-like transporter family 25 138 IPR000620 GO:0016020|GO:0016021
Bda03g00533 378 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00533 Bda13g01485 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00533 Bda-Chr3:4434334 Bda14g00333 Bda-Chr14:2320587 3.12E-126 dispersed
Bda13g01413 Bda-Chr13:36847609 Bda03g00533 Bda-Chr3:4434334 1.61E-80 dispersed
Bda03g00533 Bda-Chr3:4434334 Bda14g00309 Bda-Chr14:2083309 4.27E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00533 - - mesc:110605754 504.982