Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00583 ATGTACAAGTTCTACAAGCTTGTTGAGCATGAAAGCAGGCCTCGTGATTATATAGATTCACAGCCTGAGATAAATGTTCAAATGAGATCTATTCTGGTGGATTGGCTGGTTGATGTTCATAACAGATTCGAACTTTGCCCTGAAACATTCTACCTGGCAATCAACATAATCGACCGATTTCTGGCAGCCAAGAAGGTGATGAGAAAAGAACTGCAGTTGGTGGGTATAAGTGCAATGCTGATAGCCTCAAAATACGAAGAAATCTGGGCTCCTTTGGTTGACGACTTTGTCTGTCTTTCAGACAGAGCTTACACCCCTGATCAAATCTTGAAGATGGAAAAAACAATTCTGGGAGAGCTCGAATGGACATTGACCGTGCCTACGCCATACGTGTTTCTTGTTCGGTTCATCAAGGCCTCTAAAGATGTCGATTTAGAAATGGAGAATATGGTTTACTTTTTAGCTGAACTGGGAATGATGCATTATGCGGCTGTGATAATGTACTCCCCGTCGATGATTGCTGCCTCGGCAGTCTACGTTGCTCGATGTACTCTGAACAAGAACACTGCCTGGAATGAAACTCTGAAGTTCCATTCTGGCTTTTCTGAATCACAGCTCGTCGATTGTGCGAAATTGTTGGTGGGCTTCCACGAAATGACGAGTAAGAGCCGGCTGCAGGTTGTGTGCAAGAAGTACTCAAAGTCGGAGAGAGGTGGTGTGGCTCTGCTTCAGCCGGCCAAGAAATTGGGGCCGGCCGGTGACGAGCTGTGA 771 45.78 MYKFYKLVEHESRPRDYIDSQPEINVQMRSILVDWLVDVHNRFELCPETFYLAINIIDRFLAAKKVMRKELQLVGISAMLIASKYEEIWAPLVDDFVCLSDRAYTPDQILKMEKTILGELEWTLTVPTPYVFLVRFIKASKDVDLEMENMVYFLAELGMMHYAAVIMYSPSMIAASAVYVARCTLNKNTAWNETLKFHSGFSESQLVDCAKLLVGFHEMTSKSRLQVVCKKYSKSERGGVALLQPAKKLGPAGDEL 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4846927 4848033 - Bda016554.1 Bda03g00583 3842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00583 256 SUPERFAMILY Cyclin-like 3 124 IPR036915 -
Bda03g00583 256 Pfam Cyclin, C-terminal domain 127 245 IPR004367 -
Bda03g00583 256 Pfam Cyclin, N-terminal domain 1 124 IPR006671 -
Bda03g00583 256 SMART cyclin_7 131 215 IPR013763 -
Bda03g00583 256 SMART cyclin_7 34 118 IPR013763 -
Bda03g00583 256 SMART Cyclin_C_2 127 246 IPR004367 -
Bda03g00583 256 CDD CYCLIN 125 214 IPR013763 -
Bda03g00583 256 ProSitePatterns Cyclins signature. 29 60 IPR006671 -
Bda03g00583 256 Gene3D - 14 125 - -
Bda03g00583 256 SUPERFAMILY Cyclin-like 126 247 IPR036915 -
Bda03g00583 256 CDD CYCLIN 28 117 IPR013763 -
Bda03g00583 256 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 1 251 - -
Bda03g00583 256 PIRSF Cyclin_A_B_D_E 1 255 IPR039361 -
Bda03g00583 256 Gene3D - 1 241 - -
Bda03g00583 256 PANTHER CYCLINS 1 251 IPR039361 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00583 Bda-Chr3:4846927 Bda11g00971 Bda-Chr11:9465763 1.06E-74 dispersed
Bda11g00693 Bda-Chr11:6914682 Bda03g00583 Bda-Chr3:4846927 1.44E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00583 K21777 - csv:101217210 382.874