Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00590 ATGACTGTGACGCCGAGGATCTCCATCAACGACGGGAACCTGGTGGTTCATGGAAAGACCATATTGACTGGAATCCCAGACAACATTGTATTGACACCAGCATCCGGTCTGGGACTCGTCGCTGGTGCATTTATTGGTGCTACGGCTTCCCATACCAAAAGCCTTCATGTCTTCCCCGTGGGTGTCCTTGAGGACCTTCGATTCATGTGTTGTTTCCGATTTAAATTATGGTGGATGACTCAGAGGATGGGAAATTGTGGAAAAGAAATTCCATTGGAGACCCAATTTCTGCTTGTGGAGAGCAAAGACAACAATGAAGGAGGAAATCATGATGTCTCCCCAACAATATACACTATTTTCCTTCCTTTACTTGAAGGCCAATTCCGTGCTGTTCTTCAAGGGAATGACAAAAATGAGGTCGAGATCTGCCTGGAGAGCGGCGATGATTCTATTGAGACCAATCAAGGTCTTAACCTAGTTTACGTGCACGCTGGGACAAATCCGTTTGAAGTTACTAGTCAAGCTGTAAAGGCTGTAGAAAAGCACACCCAAGCTTTTCATCATCGAGAGAGGAAAAAGTTGCCTTCTTTCCTTGACTGGTTTGGTTGGTGCACATGGGATGCGTTTTACACTGATGTCACAGCTGAAGGAGTTGAAGAAGGCCTCAAAAGCTTGTCAGAAGGAGGAACTCCTCCTAGATTCTTAATCATAGATGATGGTTGGCAACAGATAGAGAGCAAAGGAAAGGATGCTGATTGCGAGGTTCAAGAAGGAGCACAATTTGCTAGTAGATTGACAGGAATAAAAGAGAACGCAAAATTCCAAAAGAATGGACATAATGACGGTCATGTCTCTGGACTGAAGCATGTTGTGGATGGAGCCAAACAACATTACAATGTGAAGAATGTGTATGTGTGGCATGCTCTAGCTGGATATTGGGGTGGAGTAAAGCCATTAGCTGCAGGCATGGAACATTACGACACTGCTTTGGCATATCCGATTCAGTCCCCCGGTGTTCTGGGTAATCAACCTGACATTGTCATGGATAGTCTAGCTGTTCATGGCCTGGGTCTTGTGCATCCAAAGAAAATATTCAACTTCTACAATGAACTTCATTCCTACTTAGCTTCATGTGGAGTAGATGGAGTAAAAGTTGATGTGCAGAACATTATTGAAACCCTTGGGGTTGGTCATGGTGGCAGAGTATCTCTGACTCGCAGCTACCTTCAGGCACTCGAAGCCTCGATTTCTCGAAACTTTCCTGACAATGGATGTATTGCCTGCATGTGTCACAACACCGATGGACTCTACAGTGCTAAACAGACGGCTGTGGTCAGGGCTTCCGATGACTTCTATCCTAGGGATCCCTCGTCTCACACCATTCATATTTCATCTGTGGCCTACAATACTCTCTTTCTTGGTGAATTCATGCAACCCGACTGGGATATGTTCCAAAGCCTACATCCTGCTGCTGAGTATCACGGTGCAGCTCGAGCAATTGGTGGATGTGCAATCTATGTCAGTGACAAGCCAGGAAACCACAACTTTGAAATATTAAAGAAGCTGGTTCTCCCTGATGGATCTGTTCTCCGTGCTCAACTGCCTGGAAGACCAACTCGTGATTCCCTATTCGCTGATCCTGCTAGAGATGGAACAAGCTTGCTCAAAATTTGGAATATGAACAAGTGCTCTGGTGTGGTTGGGGTGTTCAACTGCCAAGGTGCTGGTTGGTGTAAGATCACCAAGAAGACCCGCATTCACGATGAATCTCCCGGTACTCTTACCTGTTCTGTCTATGCTAACGATGTCGAGAACATTGCTCAAATTGCGGGTCCAGATTGGAACGGGGAGACTGCAGTCTATGCCTACAAATCTGGAGAGTTGATCCGGCTACCAAAAGGAGTTTCTTTGCCTGTTACACTCAAGGTCCTTGAATACGAACTTTTCCATTTCTGTCCAATCAAAGAAATCACCTCCTACATTTCAATTGCACCAATAGGTCTACTTGACATGTTCAATGCCGGTGGTGCTGTGGATCAAGTCGAGATCAACCCCAAATCAGAATCTGACCAGCCACCCGAGCTCTTCGACGGTGAAGTTCAATCTGAGCTGACCACTTCACTGAGCAAAAACCGATCCCCGACTGCAACAATCACCTTCAAAGTCAGAGGCTGCGGCCGATTTGCTGCATACTCGTCTCAAATTCCGCTCAAGTGCAAAGTTGACAATACCAACACCGACTTTGACTATGATGCCACAACAGGACTCACTACATTTACCATTCCCATTCCAAGAGAGGATATGTTCAAATGGTCATTTTGTGCTGGATGTCTTTTTTTCCTTCTTCAGGCAAAAGCATCAAAGCAGATCGGCGGACGTCAAGTTTGCCAAATCTGCAGCGACTCTGTTGGAAAAACTGTTGATGGGGAGCCGTTTGTTGCGTGCAATGTTTGTAATTTTCCTGTTTGTAGACCCTGCTATGAGTATGAAAGAAAGGATGGAAATAAGTCCTGTCCTCAATGCAAGACTAAATACAAGTGGCTTAAAGGAAGCCCTCTGGTTAATGGGGAAGAAGGAGATGATTCTGATGTTAATGGAGGGGCGAATGCTCCCAATTACAATTCTACTGAAGGAGATATGAAGTATAAGCTACCTGAACGTACTCTTAGTTGGGATACAAACTATGATAAAGAAGGATCCTTCAATCATATTCCATTGCTCACCACTGGACGCTCTGTTTCTGGAGACCTATCAGCTGCATCCCCTGAACGCCTGTCAATGGCGTCTCCAGAAAGCTTGAGCAGGACTAATTATAGAATAGTGGACCCTTCGAGAGAGGCTGGGTCGAATGGACTTGGCGGTGTTGCCTGGAAAGAGAGAATTGATGGTTGGAAGATGAAGCAGGAGAAGAGTCATCCTCCAATGAGTAGCCATGCTCCCTCTGAAGGTAGAGGAGGCGCAGACTTTGATGCCAGTACTGATATTGTTATGGATGATTCTTTGCTAAATGATGAAGCGCGCCAGCCTTTATCAAGGAAGGTTTCGATTCCATCTTCCAGGATCAATCCTTACAGGATGGTTATAGTTCTACGTCTTGTTATTCTTTCCATCTTCCTCCATTACCGTTTGACGAACCCGGTTCCCAATGCATTTGCTTTGTGGTTAATATCTGTCATTTGTGAGATATGGTTTGCATTTTCATGGATTTTGGATCAATTCCCCAAGTGGATCCCTGTGAACCGTGAGACATATCTTGATAGGCTAGCACTGAGGTATGATAGAGAAGGAGAGCCTTCTCAGTTGGCAGCTGTAGACATTTTTGTGAGTACGGTTGACCCTCTAAAGGAACCTCCTCTTGTCACGGCCAACACTGTTTTGTCTATTCTGGCAGTGGACTACCCAGTCGACAAAGTTTCTTGCTATGTCTCAGACGATGGAGCTGCTATGTTGACATTTGAAGCTTTGTCTGAAACATCTGAATTTGCAAGAATATGGGTTCCTTTCTGCAAAAAATATAACATTGAGCCAAGAGCTCCAGAGTGGTATTTTTCACAGAAGATTGACTATTTGAAAGATAAGGTTCAACCATCATTTGCCAAAGATCGAAGGGTGATGAAGAGAGAGTACGAAGAGTTTAAAATAAGAATCAATGTACTTGTTGCAAAGGCGCAAAAGATTCCTGATGAAGGGTGGATCATGCAAGATGGAACCCCTTGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGACATAGTGGAGGGCTCGACAGTGAGGGTAATGAGCTACCCCGGCTAGTTTATGTATCTCGTGAGAAGCGGCCTGGATTTCAGCACCACAAGAAGGCTGGTGCCATGAACGCACTTGTTCGTGTGTCGGCTGTGCTTACAAATGGCCCCTTCTTATTGAATCTCGATTGTGATCATTACATAAACAACAGCAAGGCATTGAGGGAAGCTATGTGTTTTCTAATGGATCCAAATCTTGGCAAGTCTGTTTGTTATGTTCAATTTCCTCAGAGATTTGATGGAATTGATAGAAACGATCGATATGCAAATCGAAACACAGTGTTCTTTGATATCAATTTAAGGGGCTTGGACGGCATCCAAGGTCCAGTTTACGTCGGAACGGGATGTGTTTTCAATCGAACTGCCTTGTATGGTTACGAGCCACCTGTCAAGTCTAAGCATAAGAAACGAGGACTGTTCTCTTTTGGTGGGAAAAAGAGTTCGAAATCAAGTAGGAAGGGCTCTGATGGTAAAAAATCGAGCAAGCATGCTGACCCCACCGTGCCAATATTTAACCTAGAGGATATTGAGGAAGGAGTTGAAGGTTCTGGGTTTGACGATGAGAAGTCACTGCTCATGTCACAGATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCCGTTTTTGTCGCTTCGACATTGATGGAGAATGGTGGGGTTCCACAGTCAGCCATTGCTGAATCCCTCCTCAAAGAAGCTATTCACGTCATTAGTTGTGGATATGAAGACAAGACAGAGTGGGGAACTGAGATAGGATGGATCTATGGCTCTGTTACAGAGGATATTCTTACGGGTTTTAAGATGCATGCTCGTGGATGGAGATCGATCTACTGCATGCCAAAGCTTGCAGCATTTAAAGGATCAGCTCCGATAAATCTTTCCGACCGGCTAAATCAAGTGCTGCGATGGGCTTTAGGTTCAGTTGAAATTCTTTTCAGTCGTCACTGTCCTATATGGTATGGCTATGGAGGGAGGCTCAAATGGCTTGAGAGATTTGCTTACATTAATACCACCATTTACCCATTAACATCCATCCCTCTTCTTGCCTACTGCACATTGCCGGCCATATGTCTGCTCACTGGCCAGTTCATCATTCCACAGATTAGTAACATTGCCAGTATCTGGTTCATATCTCTCTTTCTTTCCATCTTCGCCACCGGAATATTGGAAATGAGATGGAGCGGCATTGGTATCGACGAATGGTGGAGAAACGAACAATTCTGGGTTATCGGTGGTGTGTCGGCCCATCTCTTTGCCGTTTTCCAAGGCCTGCTCAAAGTCCTTGCCGGAATCGACACAAATTTCACTGTCACCTCCAAAGCTTCCGATGAAGATGGCGATTTTGCAGAGCTCTACTTGTTCAAATGGACAACTCTCCTCATCCCTCCGACGACTCTACTCATCCTCAACTTAGTCGGAGTAGTTGCTGGAGTCTCTTACGCCGTTAACAGTGGCTACCAATCTTGGGGTCCTCTTTTTGGGAAGCTGTTTTTTGCTTTCTGGGTGATCATCCATCTTTATCCATTCCTTAAAGGTCTGATGGGGCGTCAGAATCGAACACCCACCATCGTTGTAGTCTGGTCTATTCTCCTTGCTTCCATTTTCTCGTTGTTGTGGGTTCGAATTGATCCTTTCACCACCCGAGTTACCGGTCCAGATGTCCAACAGTGTGGAATCAACTGCTAG 5487 45.25 MTVTPRISINDGNLVVHGKTILTGIPDNIVLTPASGLGLVAGAFIGATASHTKSLHVFPVGVLEDLRFMCCFRFKLWWMTQRMGNCGKEIPLETQFLLVESKDNNEGGNHDVSPTIYTIFLPLLEGQFRAVLQGNDKNEVEICLESGDDSIETNQGLNLVYVHAGTNPFEVTSQAVKAVEKHTQAFHHRERKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKGKDADCEVQEGAQFASRLTGIKENAKFQKNGHNDGHVSGLKHVVDGAKQHYNVKNVYVWHALAGYWGGVKPLAAGMEHYDTALAYPIQSPGVLGNQPDIVMDSLAVHGLGLVHPKKIFNFYNELHSYLASCGVDGVKVDVQNIIETLGVGHGGRVSLTRSYLQALEASISRNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPSSHTIHISSVAYNTLFLGEFMQPDWDMFQSLHPAAEYHGAARAIGGCAIYVSDKPGNHNFEILKKLVLPDGSVLRAQLPGRPTRDSLFADPARDGTSLLKIWNMNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTCSVYANDVENIAQIAGPDWNGETAVYAYKSGELIRLPKGVSLPVTLKVLEYELFHFCPIKEITSYISIAPIGLLDMFNAGGAVDQVEINPKSESDQPPELFDGEVQSELTTSLSKNRSPTATITFKVRGCGRFAAYSSQIPLKCKVDNTNTDFDYDATTGLTTFTIPIPREDMFKWSFCAGCLFFLLQAKASKQIGGRQVCQICSDSVGKTVDGEPFVACNVCNFPVCRPCYEYERKDGNKSCPQCKTKYKWLKGSPLVNGEEGDDSDVNGGANAPNYNSTEGDMKYKLPERTLSWDTNYDKEGSFNHIPLLTTGRSVSGDLSAASPERLSMASPESLSRTNYRIVDPSREAGSNGLGGVAWKERIDGWKMKQEKSHPPMSSHAPSEGRGGADFDASTDIVMDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILSIFLHYRLTNPVPNAFALWLISVICEIWFAFSWILDQFPKWIPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARIWVPFCKKYNIEPRAPEWYFSQKIDYLKDKVQPSFAKDRRVMKREYEEFKIRINVLVAKAQKIPDEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDSEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKSKHKKRGLFSFGGKKSSKSSRKGSDGKKSSKHADPTVPIFNLEDIEEGVEGSGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAIAESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLAAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPLTSIPLLAYCTLPAICLLTGQFIIPQISNIASIWFISLFLSIFATGILEMRWSGIGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLILNLVGVVAGVSYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVQQCGINC 1828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4901375 4913134 - Bda016561.1 Bda03g00590 3849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00590 1828 Pfam Raffinose synthase or seed imbibition protein Sip1 7 760 IPR008811 -
Bda03g00590 1828 Pfam Cellulose synthase 1104 1822 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bda03g00590 1828 MobiDBLite consensus disorder prediction 1417 1431 - -
Bda03g00590 1828 MobiDBLite consensus disorder prediction 1399 1434 - -
Bda03g00590 1828 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1118 1623 IPR029044 -
Bda03g00590 1828 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1222 1395 IPR029044 -
Bda03g00590 1828 SUPERFAMILY (Trans)glycosidases 197 526 IPR017853 -
Bda03g00590 1828 SUPERFAMILY RING/U-box 791 862 - -
Bda03g00590 1828 CDD mRING-HC-C4C4_CesA_plant 794 844 - -
Bda03g00590 1828 PANTHER CELLULOSE SYNTHASE 787 1828 - -
Bda03g00590 1828 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 787 1828 - -
Bda03g00590 1828 ProSiteProfiles Zinc finger RING-type profile. 796 842 IPR001841 -
Bda03g00590 1828 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 782 870 IPR013083 -
Bda03g00590 1828 Pfam Zinc-binding RING-finger 793 862 IPR027934 -
Bda03g00590 1828 MobiDBLite consensus disorder prediction 856 879 - -
Bda03g00590 1828 Gene3D Aldolase class I 199 512 IPR013785 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00738 Bda-Chr1:34669730 Bda03g00590 Bda-Chr3:4901375 0 dispersed
Bda03g00590 Bda-Chr3:4901375 Bda10g00721 Bda-Chr10:41633154 0 dispersed
Bda07g00431 Bda-Chr7:5533962 Bda03g00590 Bda-Chr3:4901375 3.31E-81 dispersed
Bda09g01025 Bda-Chr9:40379546 Bda03g00590 Bda-Chr3:4901375 0 dispersed
Bda10g00666 Bda-Chr10:40775437 Bda03g00590 Bda-Chr3:4901375 6.64E-47 dispersed
Bda12g00078 Bda-Chr12:578948 Bda03g00590 Bda-Chr3:4901375 0 dispersed
Bda14g00801 Bda-Chr14:6165274 Bda03g00590 Bda-Chr3:4901375 2.26E-87 dispersed
Bda03g00590 Bda-Chr3:4901375 Bda03g00065 Bda-Chr3:718275 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00590 K10999 - csv:101211779 1918.28