Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00638 | ATGCAGTCCGATAACTCGGAGCTCTACAGATTGCTCGCCGGAAATGGTTTCTTTGACGTCGGACGGAAAAGCTTATGCAGTTCTTCCTCGTACTGCCCTCTCGATCAATTTTCTGGAACGCCAGACACGCTTCCGTCTGCACATGAAAGAGCTCTCGTTGCTCTCAGGAATCACAAGGAGGCTGAGAAGAGGAGGAGAGAGAGAATTAATTCGCATCTCAACAAGCTTCGGAATCTTCTTTCCTGTAATTCCAAACTACTTTTTAATTTTTTTCAGACAGACAAAGCTTCTCTTCTAGCAAAAGTTGTTCAACGCGTGAAAGAACTAAAGCAACAAGCTTCTGAAATATCTGGAATCGAGACTTTCCCTTCAGAAACCGATGAAATCTCTGTGTTATCCGGCGATTTGTCCGGCGACGGGAGATCCATTTTCAAAGCCTCTTTGTGCTGCGAAGATCGCTCCGACCTCATACCAGACCTCATCGATATCCTCCACTCTCTCCACTTGAAGACTCTAACAGCTGAAATGGCGACCCTCGAAGGAAGGACCAAGAACATTCTCGTTGTTGCCCCCGAAAAAGATTCCAGCGTCGAATCGGTGCATCTCCTTCAAAACGCATTGAAATCTCTGCTTGAAAGTTCCAATCCCAGCGAAAGATCGAAGAGAAGACGGGTTTCAGATCGCCATGACCGACCGTGA | 699 | 46.78 | MQSDNSELYRLLAGNGFFDVGRKSLCSSSSYCPLDQFSGTPDTLPSAHERALVALRNHKEAEKRRRERINSHLNKLRNLLSCNSKLLFNFFQTDKASLLAKVVQRVKELKQQASEISGIETFPSETDEISVLSGDLSGDGRSIFKASLCCEDRSDLIPDLIDILHSLHLKTLTAEMATLEGRTKNILVVAPEKDSSVESVHLLQNALKSLLESSNPSERSKRRRVSDRHDRP | 232 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5431357 | 5432550 | - | Bda016618.1 | Bda03g00638 | 3897 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00638 | 232 | Coils | Coil | 59 | 79 | - | - | |
Bda03g00638 | 232 | CDD | bHLH_AtAIG1_like | 49 | 131 | - | - | |
Bda03g00638 | 232 | MobiDBLite | consensus disorder prediction | 211 | 232 | - | - | |
Bda03g00638 | 232 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 56 | 117 | IPR036638 | GO:0046983 | |
Bda03g00638 | 232 | MobiDBLite | consensus disorder prediction | 215 | 232 | - | - | |
Bda03g00638 | 232 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 53 | 109 | IPR011598 | GO:0046983 | |
Bda03g00638 | 232 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 4 | 228 | IPR045847 | GO:0003700|GO:0006355 | |
Bda03g00638 | 232 | PANTHER | TRANSCRIPTION FACTOR BHLH106-RELATED | 4 | 228 | - | - | |
Bda03g00638 | 232 | SMART | finulus | 59 | 115 | IPR011598 | GO:0046983 | |
Bda03g00638 | 232 | Pfam | Helix-loop-helix DNA-binding domain | 57 | 109 | IPR011598 | GO:0046983 | |
Bda03g00638 | 232 | Gene3D | - | 49 | 118 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02101 | Bda-Chr1:57108307 | Bda03g00638 | Bda-Chr3:5431357 | 4.55E-45 | dispersed | |
Bda03g00638 | Bda-Chr3:5431357 | Bda10g01120 | Bda-Chr10:45186331 | 1.03E-43 | dispersed | |
Bda01g00405 | Bda-Chr1:30485686 | Bda03g00638 | Bda-Chr3:5431357 | 5.37E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15678 | PF00010 | HLH | 1.60E-07 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00638 | - | K22484 | qsu:111998080 | 292.352 |