Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda03g00697 | ATGTTCCATAGAACTGAACTGTGTCGATTCAGTGGGCAAAAGATATACCCAGGAAAAGGCATAAGATTTATCCGAGGTGATTCTCAGGTTTTTTTATTTGCAAATTCAAAATGCAAGAGGTATTACCATAATAGGCTGAAGCCATCCAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGAAGGATATTGCCCAAGAAGCTGTGAAGAAGAGAAGACGTGCCACCAAGAAGCCTTACTCTAGATCAATTGTGGGTGTGACCTTGGAGGTTATCCAGAAGAGAAGAACGGAAAAGCCTGAGGTTCGTGATGCTGCCAGAGAAGCTGCTCTTCGTGAGATTAAGGAAAGAATCAAGAAGACCAAGGATGAAAAGAAGGCAAAGAAAGCTGAGGTGACAAAGGCACAGAAATCACAGGGCAAGAGCAATGTTCCCAAGGGAGCTATACCAAAGGGTCCAAAACTTGGAGGTGGAGGCGGAAAGCGCTAA | 492 | 44.72 | MFHRTELCRFSGQKIYPGKGIRFIRGDSQVFLFANSKCKRYYHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGVTLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTKAQKSQGKSNVPKGAIPKGPKLGGGGGKR | 163 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 5932484 | 5933545 | + | Bda016681.1 | Bda03g00697 | 3956 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda03g00697 | 163 | MobiDBLite | consensus disorder prediction | 117 | 163 | - | - | |
| Bda03g00697 | 163 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 6 | 58 | - | - | |
| Bda03g00697 | 163 | MobiDBLite | consensus disorder prediction | 117 | 136 | - | - | |
| Bda03g00697 | 163 | PANTHER | 60S RIBOSOMAL PROTEIN L24 | 1 | 163 | IPR000988 | - | |
| Bda03g00697 | 163 | Pfam | Ribosomal protein L24e | 4 | 67 | IPR000988 | - | |
| Bda03g00697 | 163 | Gene3D | Ribosomal protein L24e | 3 | 64 | IPR038630 | - | |
| Bda03g00697 | 163 | SMART | 4TRASH | 8 | 46 | IPR011017 | - | |
| Bda03g00697 | 163 | ProSitePatterns | Ribosomal protein L24e signature. | 10 | 27 | IPR023442 | - | |
| Bda03g00697 | 163 | PANTHER | 60S RIBOSOMAL PROTEIN L24-RELATED | 1 | 163 | - | - | |
| Bda03g00697 | 163 | CDD | Ribosomal_L24e_L24 | 4 | 56 | IPR000988 | - | |
| Bda03g00697 | 163 | Coils | Coil | 112 | 139 | - | - | |
| Bda03g00697 | 163 | Gene3D | - | 69 | 143 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda01g00377 | Bda03g00697 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00377 | Bda-Chr1:29637278 | Bda03g00697 | Bda-Chr3:5932484 | 4.87E-90 | wgd | |
| Bda03g00697 | Bda-Chr3:5932484 | Bda05g01185 | Bda-Chr5:59845722 | 6.72E-17 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda03g00697 | K02896 | - | twl:119999010 | 231.106 |