Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda03g00700 | ATGGAGGAGAAAGACAGCCCCTTTTCTGGATCGCCTGGAATCTCTGAGACCGAGTCGCCTCCGGCTCTAATGGCCGAGATGGCGCCTAAAGTGGCCGCCGTTGATGGGGAAAGAGGCTTTTTACCTTCGTCAACGATGATATCGGCGACTGAGAGAAGCGGAGGAGGAGGGTCGGGAAGTGGCGATTTTCTCATGAAAAAGAAGAGGGGAAGGCCGAGAAAGTATGATTCGGATGGGAACTTGAGCTTGGCTTACCAGAAAATGGCTTCGCCGGATGGGTTTTCTTTGTCACCCACTTCTCCTTCTGAGTTTTCGTCCAAAAAAGGGCGAGGTAGGGGTGCTGGGTCTGGAAACTGGCAGCTTCTTGCTTCATTAGGTGAATTGTTTGCTAATACTGCTGGAGGAGACTTTACGCCGCATGTTGTCACTGTTAACACCGGAGAGGATGTTGCGGCGAAAATTCTTTCGTTTTCACAGAAAGGGCCGAGAGGAATTTGCGTTCTATCGGCAAATGGAGCTGTTTCCAATGTTACCATCCGCCAACCAGGCTCTTCTGGTGGTATTTTGACGTACGAGGCATGTGCTTTGTTCTCCATCTCTATCTCCAGATTTGGACGATTTGAGATACTGTCTTTATCTGGGTCCTTCACAGTTACTGACAGTGATGGGATGAAGAGTAGAACAGGTGGATTAAGTGTATCGTTAGCGGGTCCTGATGGTCGAGTCATCGGTGGTGGTATCGCCGGTTTATTAATGGCTGCTAGCCCTATCCAAATTGTTGTCGGAAGTTTTGTGCCGAATAGCTTCAAGACGCATAAAAGAAAGAACCAACGAGAATATGCAATGTCTCCCCCGATCAGAGCTGCGACGGAGGCTGTCTCGTCAGCAAGGCCGATCTCGCAAGTGAATCCCGACAGCGAAATCTGTTTGGCTCCGTCGACGGGGCCAACAAACGGGGAAGTGGATAGGTTGGGGAGCGACAAGCACAATCTGAATTTTCCGTCGGAGAATACTTCTTGGACTATATCAGCTCCATCGCTATCCGATCAGAGGCATTCTCCGGATATTAACATTTCTATGTCGTTTGGAGAACAGAACTAA | 1101 | 49.41 | MEEKDSPFSGSPGISETESPPALMAEMAPKVAAVDGERGFLPSSTMISATERSGGGGSGSGDFLMKKKRGRPRKYDSDGNLSLAYQKMASPDGFSLSPTSPSEFSSKKGRGRGAGSGNWQLLASLGELFANTAGGDFTPHVVTVNTGEDVAAKILSFSQKGPRGICVLSANGAVSNVTIRQPGSSGGILTYEACALFSISISRFGRFEILSLSGSFTVTDSDGMKSRTGGLSVSLAGPDGRVIGGGIAGLLMAASPIQIVVGSFVPNSFKTHKRKNQREYAMSPPIRAATEAVSSARPISQVNPDSEICLAPSTGPTNGEVDRLGSDKHNLNFPSENTSWTISAPSLSDQRHSPDINISMSFGEQN | 366 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 5951529 | 5953507 | + | Bda016684.1 | Bda03g00700 | 3959 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda03g00700 | 366 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Bda03g00700 | 366 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 34 | 361 | - | - | |
| Bda03g00700 | 366 | CDD | DUF296 | 138 | 264 | IPR005175 | - | |
| Bda03g00700 | 366 | MobiDBLite | consensus disorder prediction | 342 | 366 | - | - | |
| Bda03g00700 | 366 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 34 | 361 | IPR039605 | GO:0003680 | |
| Bda03g00700 | 366 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 136 | 275 | - | - | |
| Bda03g00700 | 366 | MobiDBLite | consensus disorder prediction | 42 | 112 | - | - | |
| Bda03g00700 | 366 | ProSiteProfiles | PPC domain profile profile. | 134 | 286 | IPR005175 | - | |
| Bda03g00700 | 366 | MobiDBLite | consensus disorder prediction | 92 | 106 | - | - | |
| Bda03g00700 | 366 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 139 | 265 | IPR005175 | - | |
| Bda03g00700 | 366 | Gene3D | - | 139 | 282 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda01g00382 | Bda03g00700 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00700 | Bda-Chr3:5951529 | Bda06g00054 | Bda-Chr6:580117 | 5.06E-69 | dispersed | |
| Bda01g00382 | Bda-Chr1:29697558 | Bda03g00700 | Bda-Chr3:5951529 | 3.42E-155 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda03g00700 | - | - | tcc:18598144 | 386.726 |