Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00700 ATGGAGGAGAAAGACAGCCCCTTTTCTGGATCGCCTGGAATCTCTGAGACCGAGTCGCCTCCGGCTCTAATGGCCGAGATGGCGCCTAAAGTGGCCGCCGTTGATGGGGAAAGAGGCTTTTTACCTTCGTCAACGATGATATCGGCGACTGAGAGAAGCGGAGGAGGAGGGTCGGGAAGTGGCGATTTTCTCATGAAAAAGAAGAGGGGAAGGCCGAGAAAGTATGATTCGGATGGGAACTTGAGCTTGGCTTACCAGAAAATGGCTTCGCCGGATGGGTTTTCTTTGTCACCCACTTCTCCTTCTGAGTTTTCGTCCAAAAAAGGGCGAGGTAGGGGTGCTGGGTCTGGAAACTGGCAGCTTCTTGCTTCATTAGGTGAATTGTTTGCTAATACTGCTGGAGGAGACTTTACGCCGCATGTTGTCACTGTTAACACCGGAGAGGATGTTGCGGCGAAAATTCTTTCGTTTTCACAGAAAGGGCCGAGAGGAATTTGCGTTCTATCGGCAAATGGAGCTGTTTCCAATGTTACCATCCGCCAACCAGGCTCTTCTGGTGGTATTTTGACGTACGAGGCATGTGCTTTGTTCTCCATCTCTATCTCCAGATTTGGACGATTTGAGATACTGTCTTTATCTGGGTCCTTCACAGTTACTGACAGTGATGGGATGAAGAGTAGAACAGGTGGATTAAGTGTATCGTTAGCGGGTCCTGATGGTCGAGTCATCGGTGGTGGTATCGCCGGTTTATTAATGGCTGCTAGCCCTATCCAAATTGTTGTCGGAAGTTTTGTGCCGAATAGCTTCAAGACGCATAAAAGAAAGAACCAACGAGAATATGCAATGTCTCCCCCGATCAGAGCTGCGACGGAGGCTGTCTCGTCAGCAAGGCCGATCTCGCAAGTGAATCCCGACAGCGAAATCTGTTTGGCTCCGTCGACGGGGCCAACAAACGGGGAAGTGGATAGGTTGGGGAGCGACAAGCACAATCTGAATTTTCCGTCGGAGAATACTTCTTGGACTATATCAGCTCCATCGCTATCCGATCAGAGGCATTCTCCGGATATTAACATTTCTATGTCGTTTGGAGAACAGAACTAA 1101 49.41 MEEKDSPFSGSPGISETESPPALMAEMAPKVAAVDGERGFLPSSTMISATERSGGGGSGSGDFLMKKKRGRPRKYDSDGNLSLAYQKMASPDGFSLSPTSPSEFSSKKGRGRGAGSGNWQLLASLGELFANTAGGDFTPHVVTVNTGEDVAAKILSFSQKGPRGICVLSANGAVSNVTIRQPGSSGGILTYEACALFSISISRFGRFEILSLSGSFTVTDSDGMKSRTGGLSVSLAGPDGRVIGGGIAGLLMAASPIQIVVGSFVPNSFKTHKRKNQREYAMSPPIRAATEAVSSARPISQVNPDSEICLAPSTGPTNGEVDRLGSDKHNLNFPSENTSWTISAPSLSDQRHSPDINISMSFGEQN 366
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 5951529 5953507 + Bda016684.1 Bda03g00700 3959
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00700 366 MobiDBLite consensus disorder prediction 1 30 - -
Bda03g00700 366 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 34 361 - -
Bda03g00700 366 CDD DUF296 138 264 IPR005175 -
Bda03g00700 366 MobiDBLite consensus disorder prediction 342 366 - -
Bda03g00700 366 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 361 IPR039605 GO:0003680
Bda03g00700 366 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 275 - -
Bda03g00700 366 MobiDBLite consensus disorder prediction 42 112 - -
Bda03g00700 366 ProSiteProfiles PPC domain profile profile. 134 286 IPR005175 -
Bda03g00700 366 MobiDBLite consensus disorder prediction 92 106 - -
Bda03g00700 366 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 265 IPR005175 -
Bda03g00700 366 Gene3D - 139 282 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda01g00382 Bda03g00700 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00700 Bda-Chr3:5951529 Bda06g00054 Bda-Chr6:580117 5.06E-69 dispersed
Bda01g00382 Bda-Chr1:29697558 Bda03g00700 Bda-Chr3:5951529 3.42E-155 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00700 - - tcc:18598144 386.726