Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00704 ATGGATGATCACTACGGCATCGCCGATCTAAGGCATCTGATAAGCGGAGGGGGTACCCATTTTCACCAGTCGACCTTTCCGCAAGTTGTGCCTCAGCTTTTTCCGGGACACCGGAATGTAGCACAGTCAGGCGAAGACTCTCACAGCCATTACGACTTGATGACGATGGCTGGTCGCCATTTGATCACAGATATGTTGCCTGAGCTTAACTCCGAATGTGATGCTGCTACTGCTACTCACATTGGTACCGCCGGTACCGGAGCTACGAGTCTGAGCACCGGTTTCGAAGTGGAAACAGTTTGTGACAGAGGCGATGGAGCAGCTAGCGGAAGATGGCCGAGGCAGGAGACTCTTATCCTACTGGAGATCAGATCTCAGCTTCATCATAAGTTCAGAGAGGCCAATCATAAGGGTCCACTATGGGACGAAGTTTCAAGAATCATGTCCGAAGAACATGGGTACCAGAGGAGTGGGAAAAAGTGCAGAGAAAAATTTGAAAATTTGTACAAATATTACAAGAAGACTAAGGAAGGAAAAACTGGAAGACAAAATGGCAAGCATTACAGATTCTTCAGACAGCTAGACGCTCTCTATGGAGAGACAAAAAATGCTGTCTCCCTCATTCAAGCTCACTGTCTCGAAACTAGGACTCTCCACCTCGATAATAATGGCGTTTTGAGTGACCAAAAAGCAAACCAAGAGACTCTTAGTTTTAATCTGTCTGATTGCTCTGAGTTTAATTCCATTTCTTCCGATGAAAATGGATATTGTACAGGGAAGCAAGTTGATAGTGATGTTTCTGGGGAAAAGAGGAGGAAAAAACGAGGAAGAAGAAGCTGGGGAGAAAAGATAAAAGAGTGTATTGACTTACAGATGAGAAAAATGATGGAGAAACAAGAGGTTTGGTTAGAGAAGCTCATGAAAACCCTAGAACAGAAGGAAAGAGATAGGATGGCGAGAGAAGAAGAATGGAGGAAACAAGACGTGAGGAGGATAGAGAAAGAACATCGAATTTGGGCCAAGGAGAGAGAATGTACTGAAGCTCGTGACGCCGCATTAATGGCGACCTTACAGAAATTAACAGGAAGAGAACCGGAGAACTCGTCTCCAATGGCCGGAAACGGAGGGGAAGATGATGGCTTTCCGGAATCTCGAAAACCTAACGAAATTAGCGAGAAACGAAAAGAGGTATCAAGTTTGATTCGGAACGTCGACGGCTACTGTCCTTACGTCCGAGGAGTAGCATATAACGCCGAAATAAGCAATCGTGGGCGAGGAGAGAGTTCCAGGCGACAAGCAAACGATGACTATTCTCCTTCTAGATCCATTAATGGCGTTCAAAATAGTTGCTTTGAGTTCTTGATGAATGACGGAGAGTCATTGTGGGACAATCATGGGTTGAAGCTTAATTAA 1413 45.15 MDDHYGIADLRHLISGGGTHFHQSTFPQVVPQLFPGHRNVAQSGEDSHSHYDLMTMAGRHLITDMLPELNSECDAATATHIGTAGTGATSLSTGFEVETVCDRGDGAASGRWPRQETLILLEIRSQLHHKFREANHKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKTGRQNGKHYRFFRQLDALYGETKNAVSLIQAHCLETRTLHLDNNGVLSDQKANQETLSFNLSDCSEFNSISSDENGYCTGKQVDSDVSGEKRRKKRGRRSWGEKIKECIDLQMRKMMEKQEVWLEKLMKTLEQKERDRMAREEEWRKQDVRRIEKEHRIWAKERECTEARDAALMATLQKLTGREPENSSPMAGNGGEDDGFPESRKPNEISEKRKEVSSLIRNVDGYCPYVRGVAYNAEISNRGRGESSRRQANDDYSPSRSINGVQNSCFEFLMNDGESLWDNHGLKLN 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5968744 5971113 - Bda016688.1 Bda03g00704 3963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00704 470 MobiDBLite consensus disorder prediction 360 396 - -
Bda03g00704 470 Gene3D - 112 174 - -
Bda03g00704 470 ProSiteProfiles Myb-like domain profile. 104 169 IPR001005 -
Bda03g00704 470 Coils Coil 296 323 - -
Bda03g00704 470 Pfam Myb/SANT-like DNA-binding domain 111 197 IPR044822 -
Bda03g00704 470 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 15 369 - -
Bda03g00704 470 PANTHER - 15 369 - -
Bda03g00704 470 MobiDBLite consensus disorder prediction 422 441 - -
Bda03g00704 470 MobiDBLite consensus disorder prediction 379 396 - -
Bda03g00704 470 CDD GT1 111 176 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00704 Bda03g01683 CCT
Bda01g00388 Bda03g00704 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00704 Bda-Chr3:5968744 Bda08g00593 Bda-Chr8:6053329 8.58E-67 dispersed
Bda05g00927 Bda-Chr5:57859223 Bda03g00704 Bda-Chr3:5968744 5.32E-08 dispersed
Bda01g00388 Bda-Chr1:29848444 Bda03g00704 Bda-Chr3:5968744 0 wgd
Bda03g00704 Bda-Chr3:5968744 Bda03g01683 Bda-Chr3:56217197 4.98E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15686 PF13837 Myb_DNA-bind_4 2.40E-20 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00704 - - jre:108985011 381.719