Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00723 ATGCCTTTCCGTAATTTTGCTATTGGCCGACCGCAAGAGGCCCTCGAACCGGAGCTATGGAAGTGCGGTGTGGCGGAGTTTATCTCGACGCTGATATTCGTTTTCGCCGGTCAAGGGTCGGGAATGGCGTTTGCCAAGTTGACGAGCAACGGCTCTACAACCGAGGCAGCGATAATCGCAGCCTCTCTCGCCCATGGTTTCGGCCTTTTCATCGGCGTCGCTGTCAGCTTTAACATCTCCGGCGGCCACGTCAACCCAGCTGTTACCTTCGGTGCATTCGTCGGTGGAAATGTTACTCTCATCCGCCTCGTTGTTTACTGGATTGGTCAGCTTCTCGGCTCTGTTGCTGCCTGCGGTCTTCTCAAATTCACCACCCACGGCATGACTACAACGGCTTTTACGTTCGCCTCAGATATTACAGTGTGGAACGCCTTCGTTTTCGAGATCGTTATGACATTCGGTCTTGTCTACACAGTCTATGCCACAGCCATTGATCCCAACAAAGGAACTCTAAAGACGATTGCTCCGATCGCAATCGGTTTCATTGTCGGCGCCAATGTTTTGGCCGGGGGTGCCTTCGAGGGAGCGTCGATGAACCCCGCCGTCTCATTTGGACCGGCGTTGGTGAGCTGGAGCTGGGACCATCAATGGGTTTACTGGGCTGGACCACTCATTGGCGGCGGTATCGCCGGCCTTGTTTTTGAAGGTTTATTCATCAAGCAAGACCACGAGCGACTCCCCGCAACTAATTTCTGA 756 53.84 MPFRNFAIGRPQEALEPELWKCGVAEFISTLIFVFAGQGSGMAFAKLTSNGSTTEAAIIAASLAHGFGLFIGVAVSFNISGGHVNPAVTFGAFVGGNVTLIRLVVYWIGQLLGSVAACGLLKFTTHGMTTTAFTFASDITVWNAFVFEIVMTFGLVYTVYATAIDPNKGTLKTIAPIAIGFIVGANVLAGGAFEGASMNPAVSFGPALVSWSWDHQWVYWAGPLIGGGIAGLVFEGLFIKQDHERLPATNF 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6106560 6107609 - Bda016707.1 Bda03g00723 3982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00723 251 Pfam Major intrinsic protein 17 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Bda03g00723 251 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Bda03g00723 251 PANTHER AQUAPORIN TIP1-1 1 250 - -
Bda03g00723 251 CDD MIP 24 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00723 251 SUPERFAMILY Aquaporin-like 13 241 IPR023271 -
Bda03g00723 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00723 Bda-Chr3:6106560 Bda07g00601 Bda-Chr7:7353841 6.15E-125 dispersed
Bda03g00723 Bda-Chr3:6106560 Bda01g00315 Bda-Chr1:28262176 5.66E-161 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00723 K09873 - jre:108996816 385.185