Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00726 ATGGCTTCGCCTTTCCAATCTCTTGTGATGTTGCTCTTTGTTCATGTCATGATATTGCATGCCTATGCCAATGCTTCCTGGCAACATGCTGTTCATCGAGCAGCAGGAGGTCGAAGCCTTATTTCTATGCCTAAGCACCGCCATCGAACACCCTTCAAGGCTGGTCCGTGGAAGACCGCTCATGCCACTTTCTACGAAGGTGACTCGGGAACGTTCGGGGGTGCTTGTGGTTACGTGAATGTCGTAGACGAAGGCTATGGCCTCGAAACAGCGGCACTAAGCTCGGTTTTGTTCAACAACGGGGAGCGCTGTGGCGCATGCTATGAAATAAAATGCGTAGACAGTCCTCAATGGTGCAAGACAGGGCAGCCATCCATCATTATTACAGCAACAAACCATTGCCCGCCAAACTTCAACCTTCCAAACGACAATGGAGGATGGTGCAATCCACCTCGCGAGCATTTCGATTTGGCCAAACCCATTTTCCTTAAAATCGCCGAATATCAGGCCGGAATCGTTCCTATAGCATACCGAAGGTTAATTTTCTTTGCTACACTTAAACAATCAATTTCGGGTAAGACTAACGAAGGGTCTTCTCTTTTCAGGGTTCCGTGCAAGAAGCAGGGAGGAATGAGGTTTACAATTACAGGAAATCCTTATTTCAATGAAGTAAGAGTGTGGAACGTTGGAGGCGCCGGAGACGTGACAGAAGTGCAAGTGAAGGGGAACAAGAAGCTGAAATGGACAACCATGAATAGATCGTGGGGACAGAAATGGGAGAGTAGTGCTATGATGGTGGGTGAGTCACTCACCTTCCGAGTTAGAGCCAGCGATGGAAGACACTCCACCTCTTGGAAAGTCGTCCCCAGCAATTGGCAATTTGGCCAGACCTTCGAAGGGAAGAACTTCAAGTAA 915 48.42 MASPFQSLVMLLFVHVMILHAYANASWQHAVHRAAGGRSLISMPKHRHRTPFKAGPWKTAHATFYEGDSGTFGGACGYVNVVDEGYGLETAALSSVLFNNGERCGACYEIKCVDSPQWCKTGQPSIIITATNHCPPNFNLPNDNGGWCNPPREHFDLAKPIFLKIAEYQAGIVPIAYRRLIFFATLKQSISGKTNEGSSLFRVPCKKQGGMRFTITGNPYFNEVRVWNVGGAGDVTEVQVKGNKKLKWTTMNRSWGQKWESSAMMVGESLTFRVRASDGRHSTSWKVVPSNWQFGQTFEGKNFK 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6128899 6130241 - Bda016710.1 Bda03g00726 3985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00726 304 Pfam Lytic transglycolase 90 177 IPR009009 -
Bda03g00726 304 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 73 180 IPR007112 -
Bda03g00726 304 Gene3D - 210 303 IPR036749 -
Bda03g00726 304 SMART dpbb_1 90 177 IPR007112 -
Bda03g00726 304 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 220 300 IPR007117 -
Bda03g00726 304 SUPERFAMILY Barwin-like endoglucanases 56 179 IPR036908 -
Bda03g00726 304 Gene3D - 41 180 IPR036908 -
Bda03g00726 304 PANTHER EXPANSIN-A15 202 304 IPR002963 GO:0009664
Bda03g00726 304 PANTHER EXPANSIN-A15 19 180 IPR002963 GO:0009664
Bda03g00726 304 Pfam Expansin C-terminal domain 211 289 IPR007117 -
Bda03g00726 304 PRINTS Expansin/Lol pI family signature 286 300 IPR007118 GO:0005576
Bda03g00726 304 PRINTS Expansin/Lol pI family signature 56 71 IPR007118 GO:0005576
Bda03g00726 304 PRINTS Expansin/Lol pI family signature 94 112 IPR007118 GO:0005576
Bda03g00726 304 PANTHER EXPANSIN-A32 19 180 - -
Bda03g00726 304 PANTHER EXPANSIN-A32 202 304 - -
Bda03g00726 304 PRINTS Expansin signature 126 136 IPR002963 GO:0009664
Bda03g00726 304 PRINTS Expansin signature 85 99 IPR002963 GO:0009664
Bda03g00726 304 PRINTS Expansin signature 112 123 IPR002963 GO:0009664
Bda03g00726 304 PRINTS Expansin signature 145 162 IPR002963 GO:0009664
Bda03g00726 304 PRINTS Expansin signature 162 175 IPR002963 GO:0009664
Bda03g00726 304 SUPERFAMILY PHL pollen allergen 207 300 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00726 Bda-Chr3:6128899 Bda02g00824 Bda-Chr2:48835106 6.66E-112 dispersed
Bda03g00726 Bda-Chr3:6128899 Bda05g00964 Bda-Chr5:58134678 1.97E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00726 - - qsu:111997113 413.69