Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00739 ATGGAGACCGTTAAGCTCGACGGATTTAAGAATGGATCATCGGAGAACGGCTCATTGGGAAGCCTGTGCAAGAGCCGCGATCCGTTGAACTGGGGAGCTGCTGCGGAGGCGCTCAAAGGGAGCCATTTGGACGAGGTGAAGCGGATGGTGGCGGAGTATCGCCGGCCGGTGATCAACCTCGGAGGGGAGAGTTTGACCATTGCTCAGGTCGCTGCTGTTGCTGGACGGGACTCGGAAGTTTCCGTCGAGCTGTCGGAATCGGCGAGGGCCGGCGTGAAGGCAAGCAGTGACTGGGTGATGGATAGTATGAACAGAGGGACTGATAGCTATGGAGTTACTACTGGGTTTGGTGCAACTTCACACAGAAGAACTAAAGAGGGTGGAGCTCTGCAGAAGGAGCTGATCAGATTCTTGAACGCCGGAATCTTCGGAAATGGAACGGAGTCTTGCCACACATTGCCGCACTCCGCCAGCAGAGCCGCGATGCTCGTAAGAATCAACACCCTCCTCCAGGGCTACTCCGGAATCAGGTTCGACATTCTGGAAGCCATAACCAAACTTCTCAACAGCAACGTTACTCCGTGTTTGCCTCTTCGTGGTACAATCACTGCCTCCGGTGACCTCGTACCCCTATCCTACATCGCCGGGCTACTCACCGGAAGACCCAACTCTAAAGCCGTTGGCCCTAACGGGGAGTCGCTCACTGCTACGGAGGCGTTCGAGCGTGCCGGTATTAAATCCGGGTTTTTCGAGCTGCAGCCGAAGGAAGGGCTGGCACTGGTCAACGGCACCGCCGTGGGATCTGGGTTGGCCTCGGTGGTGCTCTTTGAGGCTAATATTCTCGCTGTGCTGTCGGAGATCCTTTCTGCCATTTTCGCCGAGGTGATGCAGGGGAAGCCGGAGTTTACAGATCATTTGACCCATAAATTGAAGCATCATCCTGGTCAAATTGAAGCCGCCGCCATAATGGAGCACATCTTGGACGGAAGCTCATACATCAAAGCCGCAAAAAAGCTTCATGAAATGGATCCTCTGCAGAAACCGAAACAAGATCGCTACGCTCTTCGAACTTCGCCTCAATGGCTCGGCCCTCTAATTGAAGTGATCCGATTCTCAACAAAATCGATTGAAAGAGAAATCAACTCGGTCAACGATAACCCTCTGATCGATGTTTCTCGCAACAAGGCATTACACGGCGGAAACTTTCAAGGAACTCCAATTGGAGTATCCATGGATAATACCCGTTTAGCCATTGCTTCAATCGGGAAGCTGATTTTCGCCCAGTTTTCTGAACTGGTCAATGATTTCTACAACAATGGATTACCCTCGAATCTCTCTGCGGGCAGAAATCCCAGTTTGGATTACGGTTTCAAAGGAGCTGAAATCGCCATGGCTTCGTATTGCTCCGAGCTTCAGTACCTCGCAAATCCAGTAACGAGCCATGTCCAAAGTGCAGAGCAGCACAATCAAGACGTCAACTCTCTCGGCCTAATTTCATCGAGAAAAACAGCTGAAGCTATCGATATTTTGAAATTAATGTCCTCCACCTTCCTGATCGCTCTCTGCCAAGCGATCGATTTGAGGCATTTGGAGGAGAACTTGAAGAACACAGTGAAGAACACAATCAGCCAAGTTGCAAAGAAAGTTCTAACCACTAGCGCCAATGGACAGCTCCACCCATCAAGATTCTGCGAGAAGGACTTACTCAAAGTCGTCGACAGAGAATACGTTTTCGCCTACATTGACGATCCCTGCAGTGCAAATTACCCATTAATGCAGAAGCTCAGACAAGTCCTCGTCGAGCACGCGCTCACCAACGGAGAAAGCGAGAAGAACGCAAGCACTTCGATCTTCCAAAAGATCGCCGCGTTTGAAGAAGAGTTGCTGGCGATCTTGCCGAAAGAAGTGGAAGCGACAAGGGTGGCAGTCGAAAAGGGTGGCGCTGCCATCGGAAACCAGATAAAGAACTGCAGATCGTACCCACTGTACAAGTTCGTGAGGGAAGAGCTGGGAACAGGGCTGCTGACAGGGGAGAAAGTGAAGTCCCCCGGCGAAGAATGCGATGTCGTGTTCACGGCGATGTGCGAGGGAAAACTGATCGACCCTATTCTGGCCTGCTTGAGCGACTGGAATGGCGCGCCAATCCCTATCTGCTAG 2157 51.69 METVKLDGFKNGSSENGSLGSLCKSRDPLNWGAAAEALKGSHLDEVKRMVAEYRRPVINLGGESLTIAQVAAVAGRDSEVSVELSESARAGVKASSDWVMDSMNRGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHSASRAAMLVRINTLLQGYSGIRFDILEAITKLLNSNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLTATEAFERAGIKSGFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAIDLRHLEENLKNTVKNTISQVAKKVLTTSANGQLHPSRFCEKDLLKVVDREYVFAYIDDPCSANYPLMQKLRQVLVEHALTNGESEKNASTSIFQKIAAFEEELLAILPKEVEATRVAVEKGGAAIGNQIKNCRSYPLYKFVREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPILACLSDWNGAPIPIC 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6273362 6275748 + Bda016724.1 Bda03g00739 3998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00739 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Bda03g00739 718 SUPERFAMILY L-aspartase-like 27 718 IPR008948 GO:0003824
Bda03g00739 718 Pfam Aromatic amino acid lyase 65 540 IPR001106 -
Bda03g00739 718 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 23 718 - -
Bda03g00739 718 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 27 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bda03g00739 718 Gene3D - 20 264 IPR024083 -
Bda03g00739 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Bda03g00739 718 PANTHER HISTIDINE AMMONIA-LYASE 23 718 IPR001106 -
Bda03g00739 718 CDD PAL-HAL 63 528 IPR001106 -
Bda03g00739 718 Gene3D - 531 652 IPR023144 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00300 Bda03g00739 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00298 Bda-Chr1:27905124 Bda03g00739 Bda-Chr3:6273362 8.03E-11 dispersed
Bda01g00300 Bda-Chr1:27933815 Bda03g00739 Bda-Chr3:6273362 0 dispersed
Bda03g00739 Bda-Chr3:6273362 Bda03g00740 Bda-Chr3:6281911 0 tandem
Bda14g00352 Bda-Chr14:2581706 Bda03g00739 Bda-Chr3:6273362 0 wgd
Bda15g00163 Bda-Chr15:4189266 Bda03g00739 Bda-Chr3:6273362 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00739 K10775 - rcu:8284514 1245.34