Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00741 ATGATTGCATTAATGGAACCGAAAGAGATGACAAAGGAGGCCGAAAAATGCTTAGATCCTCAACTATGGCACGCCTGTGCTGGAGGAATGGTTCAAATCCCACCATTAGACACCAAGGTGTTCTACTTTCCTCAGGGCCATGCAGAGCATGCCAGTGGGCCTGTTGATTTCTGCAGTTCCCCGAGACTTCCACCGTTTATTGCTTGTCGAGTTTCGGCTGTTAAATTCATGGCTGATCTGGAAACTGACGAGGTTTATTCCAAAATCAAATTGGTTCCCCTAAACAGGAGTGAGCTCGATTTTGAGGAAGATAGAATTTGTGGGCTTAATGTGGCTGAAGTTCAGGATAAACCCGCATCGTTTGCAAAGACTTTGACTCAATCTGATGCTAATAATGGTGGGGGATTCTCTGTTCCAAGATATTGTGCGGAGACAATATTTCCACGATTGGATTACAATGTGGACCCACCTGTTCAGAACATTCTCGCTAAGGATGTTCACGGGGAGATTTGGAAATTCCGGCACATTTACAGAGGGACGCCTAGAAGACATCTCTTGACGACCGGCTGGAGTACCTTTGTGAATCATAAGAAGCTCGTTGCAGGTGATTCTATCGTTTTTCTAAGAGCAGAAAATGGAGACTTATGCGTCGGAATTCGAAGAGCAAAGAGGGGAATTGGAGGTGGGCTGGAATCGTCGGCTGGGTGGAATCCATTAGGGGAACATGGTGGATATTCCAGCTATTTGAGAGAAGAAGAAGGCATACTATTAAAGAAGACTAATGGTTTGAGCTTTAGTGGGAATGGTAAAGTTAGGCCGGAATCGGTTGTCGAGGCTGCAATGCTGGCGGCTAATGGACAGCCATTTGAAGTCATATATTACCCTCGAGCTAGCACGCCTGAATTCTGTGTGAAGGTGTCTTCTGTGAGAGCGGCAATGCTAATCCGATGGGGCTCTGGAATGAGGTTTAAAATGCCCTTTGAAACCGAGGACTCGTCGAGAATAAGCTGGTTTATGGGAACTATTTCTTCTGTTCAAGTTGCTGATCCAATTTGCTGGCCAGAGTCTCCTTGGCGTCTTCTGCAGATGCAGGTTACTTGGGACGAGCCTGATTTACTACAGAACGTAAAACGTGTTAGCCCATGGCTTGTGGAGTTGGTATCAAACATGTCAGCAATCAACCTATCCCCTTTCCCATCTCCGAGGAAAAAGCCGAGATTGCCACATCTCCCCGAATTCCCCTTCGATGCCACCCAGTTTCCGATCCCAAAATCTTTTTCCAATAACAATCACTTTGGGCCAAGTTTCCCCTTCAGTTGTCTACCAGACAAAACTTCCCCTGCTGGCATGCAGGGAGCCAGGCATGCTCTTTACAATCAATCCTTCTTGGACCTCAGCTTCGAAAAACTTCACGCCTCCCAATTCCCCATTGCTTATCCACCATTCGATCACACTTCTGCCCTCCCCACTAGGACAACGATTCAAAAGCCTAGTATGATGAGTAATGAAGTCGCAGGCTTGTTGACAATGGGGTGTCTGAAAAAATCTGATGACTCGAAGCAACCCCAACTTGTGCTTTTTGGTCAAACAATACTGACGGAACAACAACTGTCGCAGAGCTCGGGCGAAACTGCGTCCCTAGGTATTACCGGAAATAGTCCGTCAGATGTGAATGTAGATAAAGTGGGGAATTTGTCTGATGAGTCTGTCCCGACCCTTTTCAACCTGGATACGGGTCATTGTAAAGTATTTATGGAATCTGAAGATGTAGGCCGAACAATCGATCTCTCGTTGCTTGGTTCGTACGACGAGCTTTGTAGAAAGTTGGCTGATTTGTTCGGCATAGAAAACTCGGAGACATTAAACCACGTGCTCTATAGGGACGGTTCTGGTGCAGTCAAGCACATTGGCGACGAGCCATTCAGGTTCGCATCCAAAACTCCGTCTCGTCCAAAAGTTTCTAATTCAACTGCTCGTTTTTGA 1983 46.44 MIALMEPKEMTKEAEKCLDPQLWHACAGGMVQIPPLDTKVFYFPQGHAEHASGPVDFCSSPRLPPFIACRVSAVKFMADLETDEVYSKIKLVPLNRSELDFEEDRICGLNVAEVQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNVDPPVQNILAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGLESSAGWNPLGEHGGYSSYLREEEGILLKKTNGLSFSGNGKVRPESVVEAAMLAANGQPFEVIYYPRASTPEFCVKVSSVRAAMLIRWGSGMRFKMPFETEDSSRISWFMGTISSVQVADPICWPESPWRLLQMQVTWDEPDLLQNVKRVSPWLVELVSNMSAINLSPFPSPRKKPRLPHLPEFPFDATQFPIPKSFSNNNHFGPSFPFSCLPDKTSPAGMQGARHALYNQSFLDLSFEKLHASQFPIAYPPFDHTSALPTRTTIQKPSMMSNEVAGLLTMGCLKKSDDSKQPQLVLFGQTILTEQQLSQSSGETASLGITGNSPSDVNVDKVGNLSDESVPTLFNLDTGHCKVFMESEDVGRTIDLSLLGSYDELCRKLADLFGIENSETLNHVLYRDGSGAVKHIGDEPFRFASKTPSRPKVSNSTARF 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6302195 6304599 + Bda016726.1 Bda03g00741 4000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00741 660 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Bda03g00741 660 Pfam B3 DNA binding domain 121 222 IPR003340 GO:0003677
Bda03g00741 660 Gene3D - 576 657 - -
Bda03g00741 660 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 649 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bda03g00741 660 Pfam Auxin response factor 279 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bda03g00741 660 PANTHER AUXIN RESPONSE FACTOR 7 649 - -
Bda03g00741 660 CDD B3_DNA 120 221 IPR003340 GO:0003677
Bda03g00741 660 Gene3D - 119 223 IPR015300 -
Bda03g00741 660 ProSiteProfiles PB1 domain profile. 578 659 IPR000270 GO:0005515
Bda03g00741 660 Gene3D - 317 393 - -
Bda03g00741 660 SUPERFAMILY DNA-binding pseudobarrel domain 115 224 IPR015300 -
Bda03g00741 660 SMART B3_2 121 223 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00294 Bda03g00741 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00741 Bda-Chr3:6302195 Bda09g00878 Bda-Chr9:22884781 1.25E-77 dispersed
Bda01g00294 Bda-Chr1:27818086 Bda03g00741 Bda-Chr3:6302195 0 wgd
Bda14g00072 Bda-Chr14:567865 Bda03g00741 Bda-Chr3:6302195 1.16E-179 wgd
Bda02g00757 Bda-Chr2:48348964 Bda03g00741 Bda-Chr3:6302195 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15690 PF02362 B3 5.00E-20 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00741 - - fve:101313821 900.582