Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00743 ATGGCAGGTGGCTTCTCAGGCAAGGACTACCACGACCCCCCGCCGGCGCCACTGATCGACGCCGAAGAGCTCACTCGCTGGTCTTTATACAGAGCGGCAATCGCTGAATTCTTCGCCACTCTTTTGTTCCTTTACGTTACTGTAATGACGGTGATAGGATACAGTAGACAGACCGATACAGCTCACGGCGGCGAAGTTTGCGGTGGCGTTGGAATACTGGGAATTGCCTGGGCCTTCGGCGGAATGATCTTCATCCTCGTTTACTGCACCGCCGGAATCTCCGGCGGCCATATTAATCCCGCGGTCACTTTCGGACTGTTTCTTGCTCGTAAGGTCTCGTTAGTCCGAGCTATTCTGTATATGGTTGCTCAATGCTTAGGGGCCATTTGTGGTTGTGGGCTCGTGAGGGCGTTTCAGAATTCTTACTATGACAACTACCACGGCGGAGCTAACATGCTCTCCGCCGGTTACAATAAAGGCACTGGATTAGCCGCTGAAATCATCGGAACCTTCGTTCTTGTTTACACAGTTTTCTCTGCAACAGACCCGAAGAGAAATGCCAGAGATTCTCACGTTCCGGTTTTGGCGCCACTGCCGATTGGTTTTGCGGTGTTCATGGTTCATCTAGCGACCATTCCGATAACCGGCACTGGAATCAACCCAGCTCGAAGCTTTGGAGCTGCTGTGATTTACAACAAAGATAAAGCCTGGGATGATCAATGGATGTTCTGGCTAGGGCCATTCGTGGGAGCCGCCATCGCTACATTTTATCACCAGTACATTCTGCGAGCAGGCGCAGTGAAAGCGTTGGGGTCTTTCAAGAGCACCTACTAA 834 51.68 MAGGFSGKDYHDPPPAPLIDAEELTRWSLYRAAIAEFFATLLFLYVTVMTVIGYSRQTDTAHGGEVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYMVAQCLGAICGCGLVRAFQNSYYDNYHGGANMLSAGYNKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKDKAWDDQWMFWLGPFVGAAIATFYHQYILRAGAVKALGSFKSTY 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6309940 6310936 + Bda016728.2 Bda03g00743 4002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00743 277 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 276 IPR034294 -
Bda03g00743 277 Pfam Major intrinsic protein 23 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Bda03g00743 277 PANTHER AQUAPORIN PIP2-4-RELATED 5 276 - -
Bda03g00743 277 SUPERFAMILY Aquaporin-like 23 263 IPR023271 -
Bda03g00743 277 Gene3D Glycerol uptake facilitator protein. 16 277 IPR023271 -
Bda03g00743 277 CDD MIP 31 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 TIGRFAM MIP: MIP family channel proteins 35 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 PRINTS Major intrinsic protein family signature 31 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 PRINTS Major intrinsic protein family signature 201 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g00743 277 PRINTS Major intrinsic protein family signature 241 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00291 Bda03g00743 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00743 Bda-Chr3:6309940 Bda15g01030 Bda-Chr15:19294203 8.83E-147 dispersed
Bda05g01212 Bda-Chr5:60068461 Bda03g00743 Bda-Chr3:6309940 2.53E-36 dispersed
Bda01g00276 Bda-Chr1:27389525 Bda03g00743 Bda-Chr3:6309940 0 transposed
Bda01g00291 Bda-Chr1:27748217 Bda03g00743 Bda-Chr3:6309940 1.17E-136 wgd
Bda15g00387 Bda-Chr15:6795935 Bda03g00743 Bda-Chr3:6309940 6.73E-165 wgd
Bda02g00760 Bda-Chr2:48365973 Bda03g00743 Bda-Chr3:6309940 8.66E-166 wgd
Bda03g00743 Bda-Chr3:6309940 Bda09g01459 Bda-Chr9:46436180 6.18E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00743 K09872 - jre:109020874 496.123