Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00753 ATGGCTGAAGCTCCGGCGAGCCCCGGTGGAGGGAGCTTCGAAAGCGGCGAACATAGTCCCCGCAATGTTCGCGAGCAGGACAGGTACCTTCCTATTGCGAATATTAGCCGAATCATGAAGAAGGCTCTCCCTGCTAATGGAAAGATCGCCAAAGATGCGAAGGAAACCGTTCAGGAATGTGTCTCGGAATTCATTAGCTTCATCACGAGCGAGGCGAGTGACAAGTGCCAAAGAGAGAAGAGAAAGACGATTAATGGTGACGATTTACTTTGGGCTATGGCAACTTTAGGGTTTGAAGATTATATTGATCCCCTTAAAATTTACCTTGGAAGATACAGAGAGGGTGATACAAAGGGGTCAGGAAAGGGTGGAGAAGGGTCAGCTAAAAAGGATGTTCAACCAGGTCCCAATACTCAGGTTAGAAAAAGGATTATTTTTTTCAACTGGGTAAACTTTCATATTTTCTAG 468 45.73 MAEAPASPGGGSFESGEHSPRNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLGRYREGDTKGSGKGGEGSAKKDVQPGPNTQVRKRIIFFNWVNFHIF 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6355371 6356206 - Bda016738.1 Bda03g00753 4012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00753 155 MobiDBLite consensus disorder prediction 1 24 - -
Bda03g00753 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
Bda03g00753 155 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bda03g00753 155 MobiDBLite consensus disorder prediction 117 136 - -
Bda03g00753 155 SUPERFAMILY Histone-fold 26 125 IPR009072 GO:0046982
Bda03g00753 155 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 146 - -
Bda03g00753 155 Gene3D Histone, subunit A 17 143 IPR009072 GO:0046982
Bda03g00753 155 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Bda03g00753 155 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Bda03g00753 155 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Bda03g00753 155 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 146 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00753 Bda-Chr3:6355371 Bda13g00590 Bda-Chr13:6927795 7.76E-59 dispersed
Bda14g00336 Bda-Chr14:2403587 Bda03g00753 Bda-Chr3:6355371 3.39E-70 wgd
Bda15g00184 Bda-Chr15:4420974 Bda03g00753 Bda-Chr3:6355371 3.50E-74 wgd
Bda15g00376 Bda-Chr15:6716276 Bda03g00753 Bda-Chr3:6355371 3.10E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15692 PF00808 CBFD_NFYB_HMF 9.00E-28 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00753 K08065 - gmx:100798667 245.743