Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00757 ATGAGCCTCAATGGTGATCATTATAAAGAATTTCAAGAACAGAATTTCATTCTGCAAGATGAAGAAAAGGGGGTTATTTGTAAAGTTACTTGCAAGAAACAAAGACTGCCGGAGAATTATAAGTTGAAAAACAACGCAATAGTGAATGATGTACAAGATAGGAAAGGAAAGGCTGTTCAACTCTGGGATGTTATACCAGAAAGGCAGCTGCAGCCTCAAGAATCAATGGTTTGTTGGGAGAGATTTCTACATCTTAGATCCCTCAAGGTTTTGCTTGTTGAAATTGATGATTCAACTCGTCATATTGTCAGTGCACTGCTTCGCAATTGCAGTTATGAAGTTATTGAGGCTCCAAATGGATTACAAGCATGGAAGATACTAGAAGATCTAAGTAATCATATTGATCTTATCCTCACGGAGGTGGTAATGCCTTGCTTTTCTGGGATTGGATTATTATGCAAGATTATGAACCATAAAACAAGAAACAATATTCCTGTGATTATGATGTCATCTCATGATTCAATGGGCTTAGTCTTTAAATGTTTGTCAAAGGGTGCTGTTGATTTTTTAGTGAAGCCCGTGAGAAAGAATGAGCTTAAAATTCTTTGGCAGCATGTTTGGAGAAGATGCCACGCTTCCAGCGGCAGTGGGAGTGAAAGTGGCATACAGACTCAAAAGTCTGTGAAGTCAAAAAGCATTAGAAATACAGGAAACAATACTGGCAGCGACGATGGAGAAGACAACAAGACTAATTTGAATATTGAAGATGATAGTGGGAATGGGAGTGGCACTCAGGGCTCTTGGACCAAACAAATCGTAGAAGTTGAAAGCTCAAGAGATGTGTCTGAGTGTGCAGATAGTACTTGCGCTCAAGTTGTACGCTCAAACGAAAAAGCATTTGGTGATAATGTTCCCCTTCCTCCAACAAGGGAGTTCCAGGAACAGAACAACCGACAGGATAGTGTTGCCATGTTTGACGAGGGCATGACTATCCCGCCAAAGAATCTAGATTTCGGGCTTGACCTCTCAAATGAGGTTTCAATCAAACATGTCTCTGTAAAACAAAAGAACACTGTTCTTGAGATGGGAATCAACAAATTCAACGAGCAGTTGAATAATGGACTTTTGAAACTGAATTCTGGAAGTACCACTAACAAGATAAAGTGTGAAGATGTCGCTCTGAAAGGTCTAACTAGTGATATCATTGATCCTCATGTGGATAACTCAGTGTCTACTGCTCCCAACGAACATCTAAAAATTTCAGATATCATGGGTAAATCTGCATCAGATTCAGATGGACCATCACCAGAGCTTAGTTTAAAGAGACTAAGAGGAGCTGAAGACTATCAAAATGTCACGAGACGTTTAGAGTCCACGTCTTTTTCCAGGTACAACGCAGCCTCAAATTTTAACCAGGCTCTTACTGTGCAAGTGGAAAGCAGTTCTCCATGCGAAATCTCACCTGATACTCAATCAAATTCAAGTGGAAATCCTCCAAATCAAAGCTCGAATGGGGATAGTAATAACGTTGATATGGGTTCTATTACTAATAACGCATTCACCAAGTCAAATACCATGAATAAATACTCAGTGGTGGCGCTGACAGTCCATGGTTTACAAGTATCACCCGAGAGCAAGTTCATGAAAGAAGACAAAATATCAACACCTGAGCAAATTTTACTGGACAATTGTGATGACATGGCAAGTGCGACAGTGCAAGCTCAGCCAAAGGATATTAAAAGCCTCTGTGATTCGCATGTTCGTCATCTTCTCCATCAACAAACATTACCCAGTGAGCACGGAGATTTGTCATTGAAGAAAATGGCTGTTACTCTTACCCACTGTGGGTCATCCAATTTAGACGGACGCATAGAAGGCAATGCTTCAAACTTTAGTGTTGATAGAAGTGGTTCAAGGAGTAACCCTGACAGCAATGGACAAAATGGTAAGATTCGTCCGAAGAGAAAGCAAGGTGCACCCGGAAAGAGGTTCATTATCAGAAAAGAAAGAGACTCATAG 2019 40.47 MSLNGDHYKEFQEQNFILQDEEKGVICKVTCKKQRLPENYKLKNNAIVNDVQDRKGKAVQLWDVIPERQLQPQESMVCWERFLHLRSLKVLLVEIDDSTRHIVSALLRNCSYEVIEAPNGLQAWKILEDLSNHIDLILTEVVMPCFSGIGLLCKIMNHKTRNNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPVRKNELKILWQHVWRRCHASSGSGSESGIQTQKSVKSKSIRNTGNNTGSDDGEDNKTNLNIEDDSGNGSGTQGSWTKQIVEVESSRDVSECADSTCAQVVRSNEKAFGDNVPLPPTREFQEQNNRQDSVAMFDEGMTIPPKNLDFGLDLSNEVSIKHVSVKQKNTVLEMGINKFNEQLNNGLLKLNSGSTTNKIKCEDVALKGLTSDIIDPHVDNSVSTAPNEHLKISDIMGKSASDSDGPSPELSLKRLRGAEDYQNVTRRLESTSFSRYNAASNFNQALTVQVESSSPCEISPDTQSNSSGNPPNQSSNGDSNNVDMGSITNNAFTKSNTMNKYSVVALTVHGLQVSPESKFMKEDKISTPEQILLDNCDDMASATVQAQPKDIKSLCDSHVRHLLHQQTLPSEHGDLSLKKMAVTLTHCGSSNLDGRIEGNASNFSVDRSGSRSNPDSNGQNGKIRPKRKQGAPGKRFIIRKERDS 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6371996 6377197 + Bda016742.1 Bda03g00757 4016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00757 672 MobiDBLite consensus disorder prediction 619 672 - -
Bda03g00757 672 MobiDBLite consensus disorder prediction 212 267 - -
Bda03g00757 672 MobiDBLite consensus disorder prediction 212 247 - -
Bda03g00757 672 Gene3D - 87 238 - -
Bda03g00757 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 658 IPR045279 GO:0009736
Bda03g00757 672 Pfam Response regulator receiver domain 90 200 IPR001789 GO:0000160
Bda03g00757 672 SUPERFAMILY CheY-like 86 213 IPR011006 -
Bda03g00757 672 CDD psREC_PRR 90 193 - -
Bda03g00757 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 39 658 - -
Bda03g00757 672 MobiDBLite consensus disorder prediction 619 648 - -
Bda03g00757 672 ProSiteProfiles Response regulatory domain profile. 89 207 IPR001789 GO:0000160
Bda03g00757 672 MobiDBLite consensus disorder prediction 480 516 - -
Bda03g00757 672 SMART REC_2 88 203 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00757 Bda-Chr3:6371996 Bda07g01959 Bda-Chr7:36961945 1.44E-50 dispersed
Bda14g00095 Bda-Chr14:684443 Bda03g00757 Bda-Chr3:6371996 1.96E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15694 PF00072 Response_reg 1.00E-18 CL0304 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00757 K12129 - csv:101210765 621.313