Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00781 ATGGGAAATCGTATCGGAAAAATTGGCCACTGTTTCGCCGGAGACGGAGATATTTCCAGGCGATATGAAGTCGGAGGCTCTGTGTTCTTACCGGACCCGCTCGACGAGGGTTATGGTCATTCTTTCTGCTACATACGGCCTGAACCCGACCGGGTATCGTCTTCCCACAAAGTTTTCTCCGAGGATGACATGCCTCCGATGACGACGTTCAGATCAATCTCTGGTGCCTCTGTGAGCGCCAACAACTCGACACCCCTTTCCACCTCCCTCGCCGATCTTTATCCCTACAGTACGACGTTCGATCGGGCAGCTGCTTTCGATTGTTCAAATTCCTTCGCTTCCATCCCTCTCCAGCCAGTTCCTCGCTATTCAATTTCCGGCAATTCCGTCGGAGTTCTGGGTTCGGGTCCGATCGAGAGAGTGTTTCTTTCGGGTCCTATGGAAAGAAGCTTTACTTCTGGGCCCCTCGATCGCGGGTTAAATTCAGGTTTGATTGCAAAGGGGCTCGATAAACTAGAAAGGAGCTTCTCTCATAATGGATTCGGAGCGAAACCCAGATTAAAGAAGCGCAGTTTAATTCGGATTTTGAAGAGAGCTTTATCAAAAACAATATCTCGGGGCGGCCCAAAACCTCCAATCCTGCCGACGATAGAAATCGATTCAGCTAAAGAATCAGATTCATTCAAAGACAACGAAAATTTTGTTGCTCAAAATAGTACCAATATGAGAAGCCATGTGAGCTTAATGGATGACGACGAAGACGGCGATTACTTAATGGGCAGTAAAACGCTTCAGTGGGCGCAAGGAAAAGCCGGCGAGGATCGAGTTCACGTCGTGATTTCTGAAGAGAACGGCTGGGTTTTTGTCGGAATTTATGACGGATTTAATGGACCAGATGCTCCTGATTATTTACTCGCTAATCTCTATACTTCAGTTCGAAAGGAACTCAAGAGATTGATCTGGAATGAAAAAAATGAATCCATTGCTACTTCATCGACATCGATGAATTCGTCAAATTCAAATTCAGCTGAAGAGAATTATACGCCCCAATCGAGTAATGGGAACCCGGATTCGGAAATCGATTCAAACAGGAAAACCAGCGGAATTACGAAGAGGACTCAAATTAATGGAGTAGAGGAGAAATGCGAGGGGAATCCAAAATTTTGTAAGTGCGAATGGGAAAGGGAAAGATTAGAGCACGATACGCGATTAATGTGGGACGAATCATCCGTCATTGGTAAATCTGAAGTTCTGAATGCTCTGTCTCAGGCGTTGAGGAAGACGGAGGATGAATATTTAGAGATTGCAGATAAGAAGGTAACAGTTCATCCAGAGCTAGCTTTAATGGGGTCATGTGTTTTAGTCATGTTGATGAAGGGAGAAGAAGTTTACGTGATGAACGTCGGAGATAGCCGAGCGGTTCTAGCTCAGCAATTAGAACCGGATTTCTTCGTCGGAAATCCTTACAGAGATTTCGAACGGTTCAACGAGGGAACTCAACGATCGATCGAATCACTCGAATCGTGTGGCTTGACTTCGATTCAGCTCACAATGGATCACAGCACAGACGTTGAAGCAGAAGTGAAGCGGATAAAGAAGGAGCACCCGGATGATGCTTATGCAGTAATGAACGACAGAGTAAAAGGGTATTTGAAGATCACAAGAGCCTTCGGAGCCGGGTTTCTCAAACAGCCAAAGTGGAACGATGCTCTTTTGGAGATGTTCAGAATAGACTACATCGGAAACTCCCCTTACCTAACCTGCAATCCATCGCTCTATCACTACAAACTGAAGCCAAAAGACAGATTCATAATCCTATCCTCCGATGGCCTCTTCCAATACTTCACCAACGAACAAGCCATCGCCGAGGTCGAGGCCTTCCTCACCTCATTTCCCGAAGGCGATCCCGCTCAGCACCTTATCGAAGCCGTCTTGTTCAGAGCAGCTCGAAAAGCCGGTTAG 1962 46.43 MGNRIGKIGHCFAGDGDISRRYEVGGSVFLPDPLDEGYGHSFCYIRPEPDRVSSSHKVFSEDDMPPMTTFRSISGASVSANNSTPLSTSLADLYPYSTTFDRAAAFDCSNSFASIPLQPVPRYSISGNSVGVLGSGPIERVFLSGPMERSFTSGPLDRGLNSGLIAKGLDKLERSFSHNGFGAKPRLKKRSLIRILKRALSKTISRGGPKPPILPTIEIDSAKESDSFKDNENFVAQNSTNMRSHVSLMDDDEDGDYLMGSKTLQWAQGKAGEDRVHVVISEENGWVFVGIYDGFNGPDAPDYLLANLYTSVRKELKRLIWNEKNESIATSSTSMNSSNSNSAEENYTPQSSNGNPDSEIDSNRKTSGITKRTQINGVEEKCEGNPKFCKCEWERERLEHDTRLMWDESSVIGKSEVLNALSQALRKTEDEYLEIADKKVTVHPELALMGSCVLVMLMKGEEVYVMNVGDSRAVLAQQLEPDFFVGNPYRDFERFNEGTQRSIESLESCGLTSIQLTMDHSTDVEAEVKRIKKEHPDDAYAVMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYIGNSPYLTCNPSLYHYKLKPKDRFIILSSDGLFQYFTNEQAIAEVEAFLTSFPEGDPAQHLIEAVLFRAARKAG 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6534109 6536359 - Bda016766.1 Bda03g00781 4040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00781 653 CDD PP2Cc 406 653 IPR001932 -
Bda03g00781 653 ProSiteProfiles PPM-type phosphatase domain profile. 258 653 IPR001932 -
Bda03g00781 653 PANTHER PROTEIN PHOSPHATASE 2C 17 653 IPR015655 GO:0004722|GO:0006470
Bda03g00781 653 Gene3D - 227 653 IPR036457 -
Bda03g00781 653 MobiDBLite consensus disorder prediction 328 372 - -
Bda03g00781 653 Pfam Protein phosphatase 2C 419 630 IPR001932 -
Bda03g00781 653 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 17 653 - -
Bda03g00781 653 Coils Coil 418 438 - -
Bda03g00781 653 SMART PP2C_4 246 650 IPR001932 -
Bda03g00781 653 SUPERFAMILY PP2C-like 269 647 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00781 Bda-Chr3:6534109 Bda06g01285 Bda-Chr6:43426806 5.86E-134 dispersed
Bda02g00820 Bda-Chr2:48798373 Bda03g00781 Bda-Chr3:6534109 0 wgd
Bda03g00781 Bda-Chr3:6534109 Bda09g01506 Bda-Chr9:46826262 7.86E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00781 - - bhj:120069881 790.415