Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00828 ATGGAAGAGTCGTTCAAACCTTTTCAAGGAATCAAGAACGATCTGCGAGGAAGATTGAAGTGCTACAAACATGACTGGAGTGGAGGTTTCAGTTCGGGTTTCCGGATCTTGGCTCCCACCACATACATATTTTTTGCATCAGCAATTCCCGTTATTTCATTCGGAGAACAATTGGAAAGAGATACAGATGGAGTTCTCACAGCAGTTCAAACATTAGCTTCTACTGCATTATGTGGAATTATACACTCAGTTTTAGGAGGTCAGCCTTTGTTGATTCTTGGTGTCGCAGAGCCTACTGTCCTTATGTACACTTTCATGTTCAATTTTGCTAAAGATCGACCAGAACTGGGATCGAAGCTTTTTCTAGCCTGGGCCGGATGGGTATGTGTATGGACTGCATTATTGCTTTTCCTGTTGGCTATATTAGGTGCTTGCTCCATTATTAATAGATTCACTCGTGTAGCGGGAGAGCTGTTTGGCCTTCTCATTGCAATGCTTTTCATGCAACAAGCTATCAAAGGACTCGTGGATGAGTTTGGTATACCAGAAAGGGAAAATCCAAAACTAACTGAGTTTCAGCCTTCATGGAGATTTGCAAATGGGATGTTTGCTTTGGTTCTCTCATTTGGTCTGCTGCTTACTGGATTAAAAAGCAGAAAGGCTCGGTCTTGGCGTTATGGATCTGGTTGGATGCGAGGCTTCATTGCTGATTATGGCGTCCCTCTGATGGTATTGGTATGGTCAGCCATTTCCTATCTACCATCTGGAAATGTTCCCGCAGGAATTCCAAGGCGTCTCTTCAGTCCAAATCCATGGTCTGTCGGTGCATATGATAATTGGACAATTATCAAGGAAATGCTAAATGTACCGGTTCTTTACATAGTAGGAGCTTTCATTCCAGCGACGATGATTGCCGTGCTATACTATTTTGACCACAGTGTAGCTTCTCAACTTGCTCAGCAAAAGGAATTTAACTTGAGAAAGCCGCCTTCTTTCCATTATGATTTGCTTCTTTTGGGGTTCATGGTTATCTTGTGTGGGCTAACTGGGATTCCTCCAGCAAACGGTGTCATTCCTCAGTCTCCCATGCATACAAAAAGTCTGGCTACACTGAAGCATCAGTTACTCCGCCGTCGCCTCGTGGTAGCAGCACGGAAAGGCATGAAAGAAAATGCAAGCTTGGAGCAAGTGTATCAAAGTATGCAAGAAGCCTACCAACAAATGCAGACCCCGTTGTTTGGCCAGGAACCTTCAGCTCATGGATTAAAGGAAATGAAAGAATCAACAATCCAAATCGCTTCTAGTAATGGAAACAGAGATGCCTCAATTGATGATACTGTGATTGACGTTGAGAAAGAGATTGATGACTTGTTGCCGGTTGAGGTGAAAGAACAACGGCTCAGTAACTTGCTTCAAGCTACAATGGTGGGAGCATGTGTTGCAGTCATGCCTTTCATTAAAAAGATCCCAACCTCCGTACTTTGGGGCTATTTTGCTTTCATGGCCATTGAGAGCTTGCCTGGCAACCAGTTTTGGGAAAGGATTCTATTGCTTTTCACAGCTCCAAGCAGACGATACAAGGTTCTAGAGGATTCCCATGCCACTTTTGTGGAGACAGTTCCTTTCAAGACAATTGCCATGTTTACGGCTTTTCAGACTGCTTACTTGTTGGTTTGTTTTGGGATTACATGGGTTCCCATAGCTGGACTTCTGTTCCCCTTAATGATCATGCTTTTGGTTCCTGTGAGACAATACATTTTGCCCAAGTTTTTTAAAGGGGTTCACCTCCAAGATTTAGATGCTGCCGAATATGAAGAGGCTCCGGTGCTTTCCTTCAACCTTACTCGTGGAGGAGAGATGGGGAGCAATGCATCATTTGCTGACAGTGGAGAAATGTTTGATGGTATAATCACTCGAAGCCGAGGAGAGATAATACGCACGTGGAGTCTCAAGATACCGAGCTCCCCTGCAACACCAAGAGGAACGAAAAGTCCAGACTTCAATCAGAGTCCTCGAGTTGTAGGACGAAGTCCTTTGAGTACAATGGGTGCAGACTAA 2058 44.17 MEESFKPFQGIKNDLRGRLKCYKHDWSGGFSSGFRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTALCGIIHSVLGGQPLLILGVAEPTVLMYTFMFNFAKDRPELGSKLFLAWAGWVCVWTALLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVDEFGIPERENPKLTEFQPSWRFANGMFALVLSFGLLLTGLKSRKARSWRYGSGWMRGFIADYGVPLMVLVWSAISYLPSGNVPAGIPRRLFSPNPWSVGAYDNWTIIKEMLNVPVLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLTGIPPANGVIPQSPMHTKSLATLKHQLLRRRLVVAARKGMKENASLEQVYQSMQEAYQQMQTPLFGQEPSAHGLKEMKESTIQIASSNGNRDASIDDTVIDVEKEIDDLLPVEVKEQRLSNLLQATMVGACVAVMPFIKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDSHATFVETVPFKTIAMFTAFQTAYLLVCFGITWVPIAGLLFPLMIMLLVPVRQYILPKFFKGVHLQDLDAAEYEEAPVLSFNLTRGGEMGSNASFADSGEMFDGIITRSRGEIIRTWSLKIPSSPATPRGTKSPDFNQSPRVVGRSPLSTMGAD 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7104994 7108801 - Bda016815.1 Bda03g00828 4087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00828 685 PANTHER ANION EXCHANGE PROTEIN 1 660 IPR003020 GO:0005452|GO:0006820|GO:0016020
Bda03g00828 685 MobiDBLite consensus disorder prediction 652 685 - -
Bda03g00828 685 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Bda03g00828 685 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Bda03g00828 685 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016021
Bda03g00828 685 MobiDBLite consensus disorder prediction 652 676 - -
Bda03g00828 685 Gene3D Helical hairpin bin 18 60 - -
Bda03g00828 685 PANTHER BORON TRANSPORTER 3-RELATED 1 660 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00828 Bda-Chr3:7104994 Bda13g01271 Bda-Chr13:35074482 0 dispersed
Bda03g00828 Bda-Chr3:7104994 Bda14g00809 Bda-Chr14:6216618 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00828 K24194 - tcc:18603732 1140.56