Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00840 CGTTGTCAGGGCGAGGGGGACGTCAAGATGGCGTCTGCAACAGTCAACGGAACGACAGTCTGCCCGGCTCCGATGAAGGCGACGTCGAATGGATCGTTTCAGGGGGATAATCCTCTCGATTATGCTCTTCCTCTGGCCATCCTCCAGATCTGTCTGGTGGTGGCTTTTACCAGATCCCTCGCTTTGATCCTCAGGCCTCTCAGGCAGCCCAGAGTTATTGCTGAGATCATTGGAGGAATACTGCTTGGGCCTTCTGCTCTTGGGCGAAACGAGAAATTTCTTCACACCGTCTTCCCAAAAAGAAGCATGACTGTGTTGGACACACTAGCTAGCATTGGCCTTCTCTTCTTCCTGTTTCTCGTCGGACTGGAGCTCGACATGCGGGCCCTCCGTCGCACCGGTACCAAGGCTCTAGGAATAGCACTCGCCGGCATCAGTCTCCCCTTCGTCCTCGGCATCGGCTCCTCCTTTGTCCTTCGAGCGACGATATCTACCGGAGTGAAGGAAGGCCCATTTCTCGTCTTCATGGGGGTCTCCTTGTCGATAACGGCCTTCCCTGTTCTCGCTCGAATCCTAGCCGAGCTTAAACTTCTGACTACAGATGTCGGGCGGATTGCGATGTCTGCAGCCGCCGTAAATGACGTCGCCGCTTGGATTTTGCTCGCGCTCGCCATTGCTCTGTCCGGCAACGAAACGTCTCCTCTAGTTTCCGTATGGGTTCTGCTAAGCGGGGTGGGTTTCGTTGCCTTCGTCGTCGTGGTATTAAGACCGGGACTCGCGCTAATGGCCCGACGGTCCCCTCAGGGTGAGCCGGTGAAGGAGCTCTACATATGCATCACCTTGTCGTTGGTTTTGGCAGCCAGTTTCGTCACCGATGCGATCGGAATACATGCCCTTTTCGGCGCTTTCGTCATCGGCATAGTGGTGCCCAAGGACGGGGTGTTTGCAGGGGTGCTTATAGAAAAGATAGAGGATCTGGTTTCTGGTCTTCTTCTTCCTCTTTACTTCGTCTCGAGCGGGCTGAAGACGAACGTTGCGACGATAAGCGGTGGGCTTTCTTGGGGCCTGCTTGCGATCGTCATTTTCACAGCTTGCTTTGGGAAGATTGTTGGGACTTTGGCAGTTTCGATGTTGTTCAAAGTTCCTTTCAGAGAAGCTCTGGCTCTTGGGTTCCTTATGAACACCAAAGGGCTAGTGGAGCTCATCGTCCTCAATATTGGCAAGGACAGAAAGGTATTGAACGACCAAACCTTTGCTATTTTAGTGCTAATGGCGTTGTTTACAACTTTCATTACAACCCCACTAGTTATGGCGGTGTACAAGCCTGCCAGAAAAGGATCACCGTACAAGCACCGAACCATCCGAAGAAAAGACCGCGAATCCGAGCTTCGAATACTCGCCTGCTTCCATAGCACTCGAAACATCCCCACCATGATCAACCTGATCGAGTGCTCCCGCGGGATTCGAAAAAGAGGCCGTCTTTGCATCTATGCTTTGCATCTCATGGAGCTCTCCGAGCGATCTTCCGCCATTTCCATGGTCCACAAGGCCAGAAACAACGGCCTACCGTTCTGGAACAAGAAGAGAGACAACAGAGATGAGATGATCATCGCGTTCGAGGCGTATCAGCAACTCAGCAGCGTTACCGTCCGTCCGATGACTGCAATTTCGTCTCTGAACGACATGCATGAGGATATTTGTACGAGTGCGCACCAAAAACGGGCGGCCATGATTCTGATTCCTTTCCATAAACATCAGAGAGTAGATGGGGCGATGGAGTCTCTCGGCCATTCCTTCCACACGGTGAACCAACGGGTTCTCCTTCACGCCCCTTGCAGCGTCGGAATTTTAATCGATAGAGGGCTTGGCGGGACCACCCAAGTGTCGGCTAGCGAAGTATCGTACAGTATCGTCGTGCCGTTTTTCGGCGGAGGGGACGACCGGGAAGCACTTGCCTTCGGTTTGAGGATGGCCGAACATTATCTGAAGGTGGTGAAGTTTGTTGGGTCACTGATCGAAAATGTCAACGAGGAAGCGGCGGAGGACGAAACCAGCATCTCTGAATTCTTGGGTTGCACGGAACAGGAAGATTCAATGTCATACGAAGAAAGAAACATCGGAAGCAAAACAGACATAGTGGAAGCGTTGAAGTCGTTAAACAAGTTCAATCTGTTTTTGGTCGGAAGAGCAACAATGTCGGGCACGCCATTGACAAACCGGAGCGACTGCCCGGAGCTGGGGACAGTGGGGGGATTCCTAGCGTCGTCGGAATTTTCAACGACGGCGTCGGTCGTGGTGGTTCAGGAGTACAATGCTTTGAAGAACACAAGACCACTGGTGGAGGAAGAGGCGGATGGGTACGCAAATGAAGCACCAGACACACCGGCGGCTTCAAATTTTGTGTCGGAGAGAATCATATAA 2421 52.54 RCQGEGDVKMASATVNGTTVCPAPMKATSNGSFQGDNPLDYALPLAILQICLVVAFTRSLALILRPLRQPRVIAEIIGGILLGPSALGRNEKFLHTVFPKRSMTVLDTLASIGLLFFLFLVGLELDMRALRRTGTKALGIALAGISLPFVLGIGSSFVLRATISTGVKEGPFLVFMGVSLSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGNETSPLVSVWVLLSGVGFVAFVVVVLRPGLALMARRSPQGEPVKELYICITLSLVLAASFVTDAIGIHALFGAFVIGIVVPKDGVFAGVLIEKIEDLVSGLLLPLYFVSSGLKTNVATISGGLSWGLLAIVIFTACFGKIVGTLAVSMLFKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMALFTTFITTPLVMAVYKPARKGSPYKHRTIRRKDRESELRILACFHSTRNIPTMINLIECSRGIRKRGRLCIYALHLMELSERSSAISMVHKARNNGLPFWNKKRDNRDEMIIAFEAYQQLSSVTVRPMTAISSLNDMHEDICTSAHQKRAAMILIPFHKHQRVDGAMESLGHSFHTVNQRVLLHAPCSVGILIDRGLGGTTQVSASEVSYSIVVPFFGGGDDREALAFGLRMAEHYLKVVKFVGSLIENVNEEAAEDETSISEFLGCTEQEDSMSYEERNIGSKTDIVEALKSLNKFNLFLVGRATMSGTPLTNRSDCPELGTVGGFLASSEFSTTASVVVVQEYNALKNTRPLVEEEADGYANEAPDTPAASNFVSERII 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7189169 7195899 + Bda016826.1 Bda03g00840 4099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00840 806 Pfam Sodium/hydrogen exchanger family 53 435 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda03g00840 806 PANTHER CATION/H(+) ANTIPORTER 19 17 777 - -
Bda03g00840 806 Gene3D - 45 447 IPR038770 -
Bda03g00840 806 PANTHER CATION/H + ANTIPORTER 17 777 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00840 Bda-Chr3:7189169 Bda07g00523 Bda-Chr7:6717347 1.68E-132 dispersed
Bda01g00243 Bda-Chr1:26611821 Bda03g00840 Bda-Chr3:7189169 8.93E-65 transposed
Bda01g01769 Bda-Chr1:53936533 Bda03g00840 Bda-Chr3:7189169 0 transposed
Bda06g00131 Bda-Chr6:2017833 Bda03g00840 Bda-Chr3:7189169 0 transposed
Bda07g00029 Bda-Chr7:467471 Bda03g00840 Bda-Chr3:7189169 0 transposed
Bda09g00692 Bda-Chr9:10845238 Bda03g00840 Bda-Chr3:7189169 3.83E-87 transposed
Bda14g00228 Bda-Chr14:1537113 Bda03g00840 Bda-Chr3:7189169 2.40E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00840 - - twl:119989874 1166.37