Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00854 ATGGAACCCAGGATAATCCGAGAAATCGACGCCATGCGCCGCCTTCACCACCACCCTAACATTCTCAAGATTCATGAAGTCATGGCTACCAAATCGAAGATTTACCTCGTCGTCGAGTTCGCTTCAGGCGGTGAACTTTTCGAGAAAATATCTCGCCGCGGCCGGCTCTCGGAGTCCCTCGCTCGCCGGTACTTTCAGCAGCTTGTTTTTGCTTTAGATTTCTGTCACAAGAATGGCGTCGCTCATCGAGACGTGAAGCCTCAGAATCTCCTCCTTGATAAGGACGGCATTTTGAAAGTCTCCGATTTTGGCCTCTCGGCGTTACCGGAGCAGCTTCAGAATGGCTTGCTCCACACCGCCTGTGGAACTCCGGCATACGCTGCTCCAGAGATTGTCTCCCGGCGAGGCTACGACGGTTCGAAAGCCGATGCGTGGTCCTGTGGTGTCATCCTGTTTGTCTTACTTTCCGGTTACCTTCCGTTCGACGATCGCAACATCGTCGCGATGTACCAGAAAATTTACCGCCGAGATTATCAATTTCCGGACTGGATTTCGAAGCCTGCGAAACACCTGATATTTCAGCTTCTCGATCCGAATCCGAAATCCAGGATAGGCATGGAAGCTCTCACACAAAATTCCTGGTTCCAAAAATCTTTACAATCGAAGCTTCAAAAAGACAGTGATGGCGAAAATTTTCTCATGGAATCGTTAAAGAATCGCGAGTTGGAAAATGACGTTCCGGTGATGAACGCATTCGACATAATCACGATGTCGCCAGGGCTGAACCTGTCGGGGCTTTTCGAAGAGTCGACGAAGAAGAAGGAGAAGAGATTCACAACGACATTCACGGCAGACGAGGTGGAAAAGAAGCTCACGGTGATCGGAGGAGAATTAGGGTTTCGAGTGACAAGATGTGGGAAAAGCAGAAGGATAAGGATGGGGAAAGGGAGGGTGGTTTTGATGGTGGAGATGTTGGAAATGGCGCCGAGTCTGTTGATAGTGGAGATGAAGGCGGTCGAGGCGGAGGTGGAGTTTGAGGAGCTTCAATGGAGGGATTTGAAGACAAAGCTTCAAGATGTTGTAGTTTCATGGCACTGCAACGAGTAA 1107 49.77 MEPRIIREIDAMRRLHHHPNILKIHEVMATKSKIYLVVEFASGGELFEKISRRGRLSESLARRYFQQLVFALDFCHKNGVAHRDVKPQNLLLDKDGILKVSDFGLSALPEQLQNGLLHTACGTPAYAAPEIVSRRGYDGSKADAWSCGVILFVLLSGYLPFDDRNIVAMYQKIYRRDYQFPDWISKPAKHLIFQLLDPNPKSRIGMEALTQNSWFQKSLQSKLQKDSDGENFLMESLKNRELENDVPVMNAFDIITMSPGLNLSGLFEESTKKKEKRFTTTFTADEVEKKLTVIGGELGFRVTRCGKSRRIRMGKGRVVLMVEMLEMAPSLLIVEMKAVEAEVEFEELQWRDLKTKLQDVVVSWHCNE 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7390250 7391356 - Bda016844.1 Bda03g00854 4113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00854 368 Gene3D Phosphorylase Kinase; domain 1 1 45 - -
Bda03g00854 368 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00854 368 PANTHER SERINE/THREONINE KINASE 1 366 - -
Bda03g00854 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Bda03g00854 368 SMART serkin_6 3 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00854 368 Pfam NAF domain 248 303 IPR004041 GO:0007165
Bda03g00854 368 CDD CIPK_C 250 337 - -
Bda03g00854 368 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 366 - -
Bda03g00854 368 SUPERFAMILY Protein kinase-like (PK-like) 3 224 IPR011009 -
Bda03g00854 368 Pfam Protein kinase domain 4 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00854 368 ProSiteProfiles NAF domain profile. 244 268 IPR018451 GO:0007165
Bda03g00854 368 Gene3D Kinase associated domain 1, KA1 245 362 - -
Bda03g00854 368 Gene3D Transferase(Phosphotransferase) domain 1 46 243 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00854 Bda08g00264 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00854 Bda-Chr3:7390250 Bda02g00137 Bda-Chr2:19715219 2.02E-114 dispersed
Bda03g00854 Bda-Chr3:7390250 Bda08g00264 Bda-Chr8:2698843 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69548 PF00069 Pkinase 2.80E-59 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00854 K12761 - csv:101215156 499.975