Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00859 | ATGACTCTGGTTTTAGACTCCAGTATCGACAAAATCCAAGTGTTTCTTGATGGATTTTCGGGCAAAAATTATTATTGTTCACCCAGAACTTCAAAACTTCGATCTGTTTTCATCACCGTTTATTTTTCTAGTTCTCTTTTGAATCGCTCTCTGGGAAGGATTAAGAGAAGTTTATCACCTGAAATCACTCTTCTTGTTGATGAAGACCACCATGGCTTCCGCCTCGATCAGGCCACCCTCAGTGCTCTCGTGAAGGAAAGGAATCTTCCAAAGCTTGGCGAAAATGGGGGAGTGAAGAAAATAGCGTCGGATTTGAAAACGGAACTGGACATCGGAATCAATGAGGACGAAGAGGAAATGGACCGTCGGGTGAAAGCATTCGGTTCGAACACTTACAGAACGCCGCCGGCGAAGAGCTTCTTCTTCTTCGCTTGGGAAGCTTTGAAAGATCTGACGATTTTGATTCTCCTCGGCTGCGCTGCTCTTTCTCTCGGATTCGGAATCAAACAACACGGAATCAAAGAAGGATGGTACGATGGAGGAAGCATATTCGTGGCAGTTTTCATCGTTATCTTCTTCTCTGCAATTAGTAATTACAGACAAAACAAACAGTTCGAGATATTATCAAAACTCAGTGATGATATCCAAATCGAAGTTTTACGGCGAGGAAGACGACGACCAGTTTCCATTTTCAACATCGTCGTCGGAGACATTGTTTGTCTGAAGATTGGAGATCAGATTCCGGCCGACGGGCTGTTCGTCGATGGGTATGGTTTGCAAGTCGACGAATCGAGTATGACCGGAGAAAGTGATCACGTGGAAGTAAATCGAACGGAGAATCCATTTTTGATTTCTGGAACTAAAGTGGTTGATGGATTTGGACAAATGATCGTCACTTCGGTAGGGATGAATACTACCTGGGGAGAAATGATGAGCTCAATTAGTAGAGATGTGCAGTGCCTGAAACAGAAAGGCCACGTCGTCGCCGTCACAGGCGACGGAACGAACGACGCTCCGGCGTTGAAAGAAGCTGACATCGGACTCTCTATGGGAATTCAAGGAACAGAAGTTGCAAAAGAAAGCTCCGACATAGTAATTATGGACGATAACTTCTCCTCCGTCGTAACAGTTCTAAAATGGGGAAGATGCGTTTACACCAACATCCAAAAATTCCTCCAGTTCCAACTCACCGTCAACGTCGCCGCCCTCGTAATAAACTTCATCGCCGCCGTCTCCGCCGGAGAAGTACCATTAACGGCGGTCCAACTCCTCTGGGTAAACCTAATAATGGACACTCTAGGAGCTCTCGCGCTAGCCACAGAAGGACCCACAAAAGATCTAATGGACAAAAAACCAGTGGGTCGAACAGAGCCTCTAATAACAAACGCAATGTGGAGAAACCTTCTAGCCCAAGCTTTTTACCAGATCGCCATTCTTCTTGTTCTGCAGTTTGAAGGGGAAGCCATTTTCGGGGTGAGCAAGAAGGTGAAGGAGACGTTGATCTTCAACACCTTCGTCCTGTGTCAAGTTTTCAACGAGTTTAATGCGAGGAAGATAGAGAAGAGGAATGTTTTCAAGGGAATTCTGAAGAATAAGCTGTTCTTGGGGATCGTCGGATTTACAGTTGTTCTTCAGGTGGTGATGGTGGAGTTCCTGAAGAGATTTGCAGGCACTGAGAGGCTGACTTTCGGGGAGTGGGGATTTTGTGTGGCTATGGCCTCCGTTACCTGGCCGATTGGTTGGGTTGTTAAGCTTATTCCTGTCCCGGATAGGCCTGTCCTTGGTTATCTTAAAATGGGAACACTCAACGCACTTGTTTAG | 1821 | 45.96 | MTLVLDSSIDKIQVFLDGFSGKNYYCSPRTSKLRSVFITVYFSSSLLNRSLGRIKRSLSPEITLLVDEDHHGFRLDQATLSALVKERNLPKLGENGGVKKIASDLKTELDIGINEDEEEMDRRVKAFGSNTYRTPPAKSFFFFAWEALKDLTILILLGCAALSLGFGIKQHGIKEGWYDGGSIFVAVFIVIFFSAISNYRQNKQFEILSKLSDDIQIEVLRRGRRRPVSIFNIVVGDIVCLKIGDQIPADGLFVDGYGLQVDESSMTGESDHVEVNRTENPFLISGTKVVDGFGQMIVTSVGMNTTWGEMMSSISRDVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLKWGRCVYTNIQKFLQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEGPTKDLMDKKPVGRTEPLITNAMWRNLLAQAFYQIAILLVLQFEGEAIFGVSKKVKETLIFNTFVLCQVFNEFNARKIEKRNVFKGILKNKLFLGIVGFTVVLQVVMVEFLKRFAGTERLTFGEWGFCVAMASVTWPIGWVVKLIPVPDRPVLGYLKMGTLNALV | 606 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7442225 | 7444555 | - | Bda016850.1 | Bda03g00859 | 4118 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00859 | 606 | PANTHER | CATION TRANSPORTING ATPASE | 34 | 317 | - | - | |
Bda03g00859 | 606 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 96 | 588 | IPR023298 | - | |
Bda03g00859 | 606 | PRINTS | P-type cation-transporting ATPase superfamily signature | 331 | 350 | - | - | |
Bda03g00859 | 606 | PRINTS | P-type cation-transporting ATPase superfamily signature | 355 | 367 | - | - | |
Bda03g00859 | 606 | PRINTS | P-type cation-transporting ATPase superfamily signature | 26 | 40 | - | - | |
Bda03g00859 | 606 | SUPERFAMILY | HAD-like | 318 | 388 | IPR036412 | - | |
Bda03g00859 | 606 | SMART | Cation_ATPase_N_a_2 | 92 | 168 | IPR004014 | - | |
Bda03g00859 | 606 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 318 | 575 | - | - | |
Bda03g00859 | 606 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 34 | 317 | - | - | |
Bda03g00859 | 606 | Pfam | Cation transporting ATPase, C-terminus | 416 | 586 | IPR006068 | - | |
Bda03g00859 | 606 | PANTHER | CATION TRANSPORTING ATPASE | 318 | 575 | - | - | |
Bda03g00859 | 606 | PRINTS | H+-transporting ATPase (proton pump) signature | 363 | 388 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda03g00859 | 606 | PRINTS | H+-transporting ATPase (proton pump) signature | 331 | 347 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda03g00859 | 606 | Gene3D | - | 117 | 315 | - | - | |
Bda03g00859 | 606 | Pfam | E1-E2 ATPase | 216 | 316 | - | - | |
Bda03g00859 | 606 | Gene3D | - | 146 | 316 | - | - | |
Bda03g00859 | 606 | Gene3D | - | 343 | 587 | - | - | |
Bda03g00859 | 606 | Pfam | Cation transporter/ATPase, N-terminus | 96 | 163 | IPR004014 | - | |
Bda03g00859 | 606 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 318 | 412 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00859 | Bda-Chr3:7442225 | Bda10g00562 | Bda-Chr10:39610916 | 2.53E-95 | dispersed | |
Bda03g00859 | Bda-Chr3:7442225 | Bda01g00590 | Bda-Chr1:32895573 | 4.80E-58 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00859 | K01537 | - | cpap:110808429 | 515.383 |