Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00859 ATGACTCTGGTTTTAGACTCCAGTATCGACAAAATCCAAGTGTTTCTTGATGGATTTTCGGGCAAAAATTATTATTGTTCACCCAGAACTTCAAAACTTCGATCTGTTTTCATCACCGTTTATTTTTCTAGTTCTCTTTTGAATCGCTCTCTGGGAAGGATTAAGAGAAGTTTATCACCTGAAATCACTCTTCTTGTTGATGAAGACCACCATGGCTTCCGCCTCGATCAGGCCACCCTCAGTGCTCTCGTGAAGGAAAGGAATCTTCCAAAGCTTGGCGAAAATGGGGGAGTGAAGAAAATAGCGTCGGATTTGAAAACGGAACTGGACATCGGAATCAATGAGGACGAAGAGGAAATGGACCGTCGGGTGAAAGCATTCGGTTCGAACACTTACAGAACGCCGCCGGCGAAGAGCTTCTTCTTCTTCGCTTGGGAAGCTTTGAAAGATCTGACGATTTTGATTCTCCTCGGCTGCGCTGCTCTTTCTCTCGGATTCGGAATCAAACAACACGGAATCAAAGAAGGATGGTACGATGGAGGAAGCATATTCGTGGCAGTTTTCATCGTTATCTTCTTCTCTGCAATTAGTAATTACAGACAAAACAAACAGTTCGAGATATTATCAAAACTCAGTGATGATATCCAAATCGAAGTTTTACGGCGAGGAAGACGACGACCAGTTTCCATTTTCAACATCGTCGTCGGAGACATTGTTTGTCTGAAGATTGGAGATCAGATTCCGGCCGACGGGCTGTTCGTCGATGGGTATGGTTTGCAAGTCGACGAATCGAGTATGACCGGAGAAAGTGATCACGTGGAAGTAAATCGAACGGAGAATCCATTTTTGATTTCTGGAACTAAAGTGGTTGATGGATTTGGACAAATGATCGTCACTTCGGTAGGGATGAATACTACCTGGGGAGAAATGATGAGCTCAATTAGTAGAGATGTGCAGTGCCTGAAACAGAAAGGCCACGTCGTCGCCGTCACAGGCGACGGAACGAACGACGCTCCGGCGTTGAAAGAAGCTGACATCGGACTCTCTATGGGAATTCAAGGAACAGAAGTTGCAAAAGAAAGCTCCGACATAGTAATTATGGACGATAACTTCTCCTCCGTCGTAACAGTTCTAAAATGGGGAAGATGCGTTTACACCAACATCCAAAAATTCCTCCAGTTCCAACTCACCGTCAACGTCGCCGCCCTCGTAATAAACTTCATCGCCGCCGTCTCCGCCGGAGAAGTACCATTAACGGCGGTCCAACTCCTCTGGGTAAACCTAATAATGGACACTCTAGGAGCTCTCGCGCTAGCCACAGAAGGACCCACAAAAGATCTAATGGACAAAAAACCAGTGGGTCGAACAGAGCCTCTAATAACAAACGCAATGTGGAGAAACCTTCTAGCCCAAGCTTTTTACCAGATCGCCATTCTTCTTGTTCTGCAGTTTGAAGGGGAAGCCATTTTCGGGGTGAGCAAGAAGGTGAAGGAGACGTTGATCTTCAACACCTTCGTCCTGTGTCAAGTTTTCAACGAGTTTAATGCGAGGAAGATAGAGAAGAGGAATGTTTTCAAGGGAATTCTGAAGAATAAGCTGTTCTTGGGGATCGTCGGATTTACAGTTGTTCTTCAGGTGGTGATGGTGGAGTTCCTGAAGAGATTTGCAGGCACTGAGAGGCTGACTTTCGGGGAGTGGGGATTTTGTGTGGCTATGGCCTCCGTTACCTGGCCGATTGGTTGGGTTGTTAAGCTTATTCCTGTCCCGGATAGGCCTGTCCTTGGTTATCTTAAAATGGGAACACTCAACGCACTTGTTTAG 1821 45.96 MTLVLDSSIDKIQVFLDGFSGKNYYCSPRTSKLRSVFITVYFSSSLLNRSLGRIKRSLSPEITLLVDEDHHGFRLDQATLSALVKERNLPKLGENGGVKKIASDLKTELDIGINEDEEEMDRRVKAFGSNTYRTPPAKSFFFFAWEALKDLTILILLGCAALSLGFGIKQHGIKEGWYDGGSIFVAVFIVIFFSAISNYRQNKQFEILSKLSDDIQIEVLRRGRRRPVSIFNIVVGDIVCLKIGDQIPADGLFVDGYGLQVDESSMTGESDHVEVNRTENPFLISGTKVVDGFGQMIVTSVGMNTTWGEMMSSISRDVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLKWGRCVYTNIQKFLQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEGPTKDLMDKKPVGRTEPLITNAMWRNLLAQAFYQIAILLVLQFEGEAIFGVSKKVKETLIFNTFVLCQVFNEFNARKIEKRNVFKGILKNKLFLGIVGFTVVLQVVMVEFLKRFAGTERLTFGEWGFCVAMASVTWPIGWVVKLIPVPDRPVLGYLKMGTLNALV 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7442225 7444555 - Bda016850.1 Bda03g00859 4118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00859 606 PANTHER CATION TRANSPORTING ATPASE 34 317 - -
Bda03g00859 606 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 588 IPR023298 -
Bda03g00859 606 PRINTS P-type cation-transporting ATPase superfamily signature 331 350 - -
Bda03g00859 606 PRINTS P-type cation-transporting ATPase superfamily signature 355 367 - -
Bda03g00859 606 PRINTS P-type cation-transporting ATPase superfamily signature 26 40 - -
Bda03g00859 606 SUPERFAMILY HAD-like 318 388 IPR036412 -
Bda03g00859 606 SMART Cation_ATPase_N_a_2 92 168 IPR004014 -
Bda03g00859 606 PANTHER CALCIUM-TRANSPORTING ATPASE 318 575 - -
Bda03g00859 606 PANTHER CALCIUM-TRANSPORTING ATPASE 34 317 - -
Bda03g00859 606 Pfam Cation transporting ATPase, C-terminus 416 586 IPR006068 -
Bda03g00859 606 PANTHER CATION TRANSPORTING ATPASE 318 575 - -
Bda03g00859 606 PRINTS H+-transporting ATPase (proton pump) signature 363 388 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda03g00859 606 PRINTS H+-transporting ATPase (proton pump) signature 331 347 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda03g00859 606 Gene3D - 117 315 - -
Bda03g00859 606 Pfam E1-E2 ATPase 216 316 - -
Bda03g00859 606 Gene3D - 146 316 - -
Bda03g00859 606 Gene3D - 343 587 - -
Bda03g00859 606 Pfam Cation transporter/ATPase, N-terminus 96 163 IPR004014 -
Bda03g00859 606 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 318 412 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00859 Bda-Chr3:7442225 Bda10g00562 Bda-Chr10:39610916 2.53E-95 dispersed
Bda03g00859 Bda-Chr3:7442225 Bda01g00590 Bda-Chr1:32895573 4.80E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00859 K01537 - cpap:110808429 515.383