Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00888 TTTGCTCCCATGGAAACGATGGTTTCTCTTTCACTAGTCGTCTTCTCCGTTGCTTTGGCAGCCATACTCAGATGGGTATGGAGGATGGCGAAATGGGTATGGCTGAAACCCAAGAAGCTAGAGAGATATCTGAGGAAGCAAGGATTGACCGGAAAGCCTTACCGGATTTTGTTCGGAGATTTGAAGGAGGAGGCAAAGATGAGAGAGGAAGCCAAGTCTCGGCCGATCAACTTCTCAAACGATATTTTAGCTCGAGTTCATCCTCTGCACCACCAGATGCTCAAAACCCACGGGAAAAACTTTTTCATGTGGGTTGGACCGAAACCCAGAGTAAACATCACAGACCCAGGTCAGATAAAGGCAATATTTTCCAACGTTAACGAGTTCGAGAAAGAAGATCCTCATCCCCAACTTGTATTGCTCGCTCCTGGTCTTATCACCTATGGCGGAGTCAAATGGGCTAAACACAGAAAAATCGTCAATCCCGCCTTCCATTCTGAAAAATTGAAGATTATGTTGCCAGCCTTCCATCAAAGTTGCAGTGACATGATTAGTGAATGGGAGAAGCTAATCTTTGCACAAGATAAAGGTTGTGAGTTAGATGTATGGCCCTCTGTGCATGTTCTTTCTAGAGACGCCATTTCTCGAACTGCATTCGGAAGCAGCTACAAAGAAGGAGAAAGGATGTTCGACCTTCAAAGCGAGCTAGTCAGACTCATTATGCTCAATCTGCAAGCAGGTTATATTCCGGGATGGAGATTTCTACCAACCAAATTGAACAAAAGGATAAAAGAAATCAACAGAGAAATCCAATATCTACTAATCGGCCTTGTAAAAAGAAGAGAGAATGCGATGAAAGCAGGCGAAGCAACCGGAGACGACTTATTAAGCATCCTCATAGAATCAAATTCAAAGGAAATCAAACAACATGGAGATGACGAGAGGCTCGGGATGAGCATTCAAGATGTGATCGACGAGTGCAAGCTGTTTTACTTGGCTGGCCAAGAGACAACTTCAGCTCTCATTGTTTGGACAATCATCTTATTGAGTGTGCATCAGGAATGGCAGGACAAAGCAAGAGCAGAAGTCTTGCAAGTCTTCGGCCACAACGACCCCCATTTTGACAGTTTAGCTCACTTAAAAATCATGACGATGATTCTATACGAGGTTCTTAGGTTATATCCTCCAGCCACAATGCTGACTAGAAAAGTTGATAAGGAAACCAAGCTTGGGAGCGTATCACTTCCACCGGGTGTATTAGTTTCAATACCTATTCTTATAGTCCACCGGGATCAAGAATTATGGGGAGACGATGCCAAAGATTTCAAACCTGAGAGGTTTTTCGAGGGCATTTTCAAGGCGACAAAAGGTCAGACCACATTTTTTCCCTTTGGGTTCGGTCCACGGATCTGTATTGGTCAGAATTTCACAATGATTCAAGCGAAGATGGCTATGTCGATGATTATGCAACGCTTCTCGTTCGAGCTTTCGCCGTCTTATGCACATTCGCCATGCATGGTGGTCACTCTTAAACCTCAGCATGGTGCTCATATCATCTTGAAGAAACTCTAG 1572 44.15 FAPMETMVSLSLVVFSVALAAILRWVWRMAKWVWLKPKKLERYLRKQGLTGKPYRILFGDLKEEAKMREEAKSRPINFSNDILARVHPLHHQMLKTHGKNFFMWVGPKPRVNITDPGQIKAIFSNVNEFEKEDPHPQLVLLAPGLITYGGVKWAKHRKIVNPAFHSEKLKIMLPAFHQSCSDMISEWEKLIFAQDKGCELDVWPSVHVLSRDAISRTAFGSSYKEGERMFDLQSELVRLIMLNLQAGYIPGWRFLPTKLNKRIKEINREIQYLLIGLVKRRENAMKAGEATGDDLLSILIESNSKEIKQHGDDERLGMSIQDVIDECKLFYLAGQETTSALIVWTIILLSVHQEWQDKARAEVLQVFGHNDPHFDSLAHLKIMTMILYEVLRLYPPATMLTRKVDKETKLGSVSLPPGVLVSIPILIVHRDQELWGDDAKDFKPERFFEGIFKATKGQTTFFPFGFGPRICIGQNFTMIQAKMAMSMIMQRFSFELSPSYAHSPCMVVTLKPQHGAHIILKKL 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7664239 7667929 + Bda016881.1 Bda03g00888 4147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00888 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 520 - -
Bda03g00888 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Bda03g00888 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PANTHER CYTOCHROME 13 520 - -
Bda03g00888 523 Gene3D Cytochrome P450 32 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 SUPERFAMILY Cytochrome P450 83 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 Pfam Cytochrome P450 87 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00888 523 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00373 Bda-Chr2:44120300 Bda03g00888 Bda-Chr3:7664239 9.15E-101 dispersed
Bda03g00255 Bda-Chr3:2285857 Bda03g00888 Bda-Chr3:7664239 2.49E-130 dispersed
Bda03g00888 Bda-Chr3:7664239 Bda09g00565 Bda-Chr9:7653485 0 dispersed
Bda10g01106 Bda-Chr10:45074624 Bda03g00888 Bda-Chr3:7664239 1.20E-13 dispersed
Bda03g00888 Bda-Chr3:7664239 Bda03g00127 Bda-Chr3:1111279 1.86E-152 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00888 - - mnt:21407373 659.062