Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00889 ATGAATGGGGTTTTGAATTCAGAAACTGATTACTCTTCTCAATATGTTGAAGTTGATCCAACTGGAAGATATGGAAGATACGATGATGTTCTCGGCAAAGGAGCTTCGAAAACAGTATATAAAGGTTTCGATGAATACCAAGGAATCGAAGTGGCGTGGAATCAAGTAAAACTCCATGATTTTCTCCGAAACCCAGAAGATTTAGAGCGATTATACTGCGAAATCCATTTGTTGAAAACCTTAAAACACAAAAACATAATGAAATTCCATACCTCCTGGGTCGATGCTTCTAACAGAAACATCAATTTCGTCACTGAAATGTTCACCTCCGGCACTCTCCGACAATTCAGATTAAAACACAGGAAAGTCAATGTCAGAGCAGTGAAGCAATGGTGCAGGCAGATTCTGAGGGGTCTCGTCTACCTCCATAACCACGATCCTCCAGTAATTCACAGAGACCTTAAATGTGACAACATTTTCGTCAATGGCAATCAAGGCGAAGTCAAGATCGGCGATCTGGGTCTTGCTGGATTCTTAAGAAAATCTCACGCTGATCACTGTGTAGGCACACCAGAGTTCATGGCTCCAGAGGTGTACGAAGAAGAATATAATGAATTGGTGGACATCTATTCTTTTGGAATGTGTATTTTGGAAATGGTTACCCTTGAATATCCCTACTCTGAATGCACTACCCCTGCTCAGATTTATAAGAAAGTTATCTCGGGCGTTAAACCGGGAGCTCTGTACAAAGTGAAAGATGAAGAAGTGAGGGAATTTGTGGGGAAATGCCTAGCAACTCTGCCGAATAGGCTCTCGGCGAAAGCTCTATTGAAAGATCGTTTTCTTCAAATCGAAGATTACGAGACCTTTATGAGAGAAGCTGACGATATCATTGATTTTGAAGAAGTTAGCCCTCTTCTAAGGCAATCTCTACATCGAATTCATCTAAGTTGCAATTTTTCGACTAATAGGTCTGGGAATCGTATCGGTTTTGCATTGGAAAATGATGAGATTGAATCGAGCGAGATTGATCTTTTTTCTCGTCACGAAGACGACCATGTTGGTAATGTCGATATCACGATAAAAGGAAGAAGAGAAGATGATGGTATCTTTTTGAGGCTCAGAATCGTGGATAAAGAAGGTCGGGTTCGAAATATCTACTTCCCCTTTGATTTAGAGACCGACACTGGCTTAAGCGTCGCATCAGAAATGGTGGATGAGCTAGACATTACGGATCAAGATGTAACCAAAATAGCTGATATGATCAACGGAGAGATATCGACTTTGGTCCCTAAGGACTCGTTTTCGTCCAACCAATCGCTTTCTTTTGGTTCCTCTGATGATCACGAAAATGAAATACGACAAGAACTTAGATGGCTCAAAGCCAAGTATCAAATGCAGCTAAGAGAGCTTAAGAACCAGCAACTCATAGCAACAACCAAGTGCTCGAGTTTGAATCGAAACCTCAGAGATTCGACGTTCGACGACGATCATGTTCGTCTGTTTATCGATGCCGATGACAAAGACGACGGTAACGATTCGTTCAAGCTCGAGTTTAGGACATCTAAGAGTTTCTACACAGGTGCCTTGAATTCTCTTCACAGAGCAACCTCACTACCTGTTGATGCAGTGCATGTTTAA 1641 41.62 MNGVLNSETDYSSQYVEVDPTGRYGRYDDVLGKGASKTVYKGFDEYQGIEVAWNQVKLHDFLRNPEDLERLYCEIHLLKTLKHKNIMKFHTSWVDASNRNINFVTEMFTSGTLRQFRLKHRKVNVRAVKQWCRQILRGLVYLHNHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAGFLRKSHADHCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMVTLEYPYSECTTPAQIYKKVISGVKPGALYKVKDEEVREFVGKCLATLPNRLSAKALLKDRFLQIEDYETFMREADDIIDFEEVSPLLRQSLHRIHLSCNFSTNRSGNRIGFALENDEIESSEIDLFSRHEDDHVGNVDITIKGRREDDGIFLRLRIVDKEGRVRNIYFPFDLETDTGLSVASEMVDELDITDQDVTKIADMINGEISTLVPKDSFSSNQSLSFGSSDDHENEIRQELRWLKAKYQMQLRELKNQQLIATTKCSSLNRNLRDSTFDDDHVRLFIDADDKDDGNDSFKLEFRTSKSFYTGALNSLHRATSLPVDAVHV 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7681203 7684008 - Bda016882.1 Bda03g00889 4148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00889 546 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00889 546 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Bda03g00889 546 Coils Coil 454 474 - -
Bda03g00889 546 SUPERFAMILY Protein kinase-like (PK-like) 19 283 IPR011009 -
Bda03g00889 546 CDD STKc_WNK 23 282 - -
Bda03g00889 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Bda03g00889 546 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 432 - -
Bda03g00889 546 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 439 498 - -
Bda03g00889 546 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Bda03g00889 546 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 371 424 IPR024678 GO:0004674|GO:0005524
Bda03g00889 546 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 432 - -
Bda03g00889 546 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 439 498 - -
Bda03g00889 546 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00889 546 Pfam Protein kinase domain 29 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00889 546 Gene3D - 350 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00889 Bda-Chr3:7681203 Bda08g01022 Bda-Chr8:21132368 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69550 PF00069 Pkinase 2.40E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00889 K08867 - mnt:21387956 670.618