Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00894 ATGTTAGGGAATCACCTACAAAATGGGATCGAGACAGCGAAGCTGGTCTGGTCTCGTCTTCCGGACGCGGAAGACGGGGAACTCGATGAGGTTGGCATCTCAAAGAAGAGTAGTGGAGGTAGCGTGGAGAGTCTCGATTACGAGGTTATTGAGAATTATGCCTATTGGGAGGAGCAGTCTCAGCGTGGAAGACTTTTGGTTGGTTACTACGTAGTGGTTAAGTGGCTCTTTGCGTTGCTCATTGGCATCGGTACTGGGTTAGCTGCAGTTTTCATAAATATTTCTGTTGAGAACTTTGCTGGATGGAAGTTTGCATTGACATTTTCCATTATACAAAAATCGTATTTCGCTGGCTTTCTTGTATATGTATTGATCAACCTTGTTTTGGTCTTTTCCTCTGTATATATCATCACACATTTTGCACCAGCTGCAGCTGGATCTGGTATACCTGAAATAAAGGGCTATCTAAATGGTGTTGATATTCATGGTGTTCTTTTCTTCAGAACCCTAATCGGAAAGATATTTGGAAGCATTGGATCGGTAGGAGGGGGCTTGGCTTTAGGCAAAGAAGGTCCTCTTGTTCATACTGGTGCTTGTATTGCTTCTTTACTAGGACAAGGTGGATCAACGAAATATCATCTGAGTTCCAGGTGGTTACAAGTATTTAAAAGCGACCGAGATCGCCGTGATCTAGTGACCTGTGGATGTGCAGCTGGAGTTGCTGCAGCTTTTAGAGCTCCAGTCGGTGGTGTATTATTTGCCTTGGAAGAAGTTACATCTTGGTGGAGGAGTCAGCTTATGTGGCGTGTATTTTTTACTTCTGCTATTGTTGCTGTTGTTGTCCGAACGGCAATGGGATGGTGTAAAAGTGGAAAGTGTGGACATTTCGGTTCTGGCGGCTTCATAATATGGGATATATCAGATGGTCAAGAGGACTACTCTTTTGGAGAGTTGTTGCCGATGGCTATTATTGGGGTCATTGGAGGCTTATTGGGTGCGTTATTCAACCAGCTTACTCTTTACATAACTTGCTGGCGCAGGAATTTCTTACACAAGAAAGGAAACAGAGTCAAGATAATTGAGGCATGTATTATCTCCTTCGTCACGTCAATTATTTCTTTTGGGCTGCCACTTCTGAGAAAATGCAGCCAATGCCCAGTAGTAGATGCTGATTCTGGTATTGAATGCCCAAGGCCTCCGGGAATGTATGGAAATTATGTAAATTTTTACTGCAGTAAGGACAATGAGTACAATGACCTAGCCACGATTTTCTTTAACACACAGGATGATGCGATAAGGAATTTGTTCAGCGCCAAAACCTTTCATGAGTTCAGCGCCCAAAGTGTCATGTTTTATTCTCTAGCTGTGGTGACATATGGCACTGCTGTTCCTGCTGGCCAATTTGTACCCGGTATAATGATTGGATCCACATATGGACGTTTAGTTGGCAAGTTGGTTGTTAAATTTTACCAGAAGCCCAACATTGAAGAGGGAACATATGCTCTTTTGGGAGCTGCTTCTTTTCTTGGAGGTTCAATGCGGATGACTGTGTCCTTGTGTGTAATAATGGTTGAAATCACGAACAATTTGAAACTTCTACCACTTATCATGCTTGTTCTTCTTATCTCAAAGGCTGTTGGAGACACTTTCAACGAAGGACTATATGAGGAACAAGCACAATTGAAGAGTATCCCATTACTGGAGTCTAGACCGAAGTATCAGATGAGGAAAATTGCTGCAAAAGATGCCTGTGGAAGAAGGGTTGTCTCCTTTCCACGTGTTGTCAAGGTTGCAGACGTGGTTGAGATTTTGAGAAGCAACAATCATAATGGATTCCCTGTGATAGATCATGGAAGAAATGGGGAAGCACTTGTGATTGGGCTCGTTCTTCGAAGTCATCTTTTGGGGCTTCTTTCGTCGAAGGAAGATTTCCAGCATAGTCCACTGCCTTCCGATCAAAGGGGATCCAGGCCAATCAGGCATAATTTGAGTGAGTTTGTGAAACCTGCTTCCAGTAAAGGCTTATCTATAGATGATATACATCTAAACTCAGATGACTCAGAAATGTACATAGATCTTTTCCCATTTTTGAATCCCTCTCCATACATCGTTCCAGAAGACATGTCTTTGACGAAGGTATATAATCTTTTCAGGCAGCTAGGTCTAAGACATATATTTGTTGTCCCTCGTCCTTCGCGCGTTGTTGGTTTAATTACTAGGAAGGATTTGTTGATTGAGGATAATGACGATTCAGACACAGTGGAACTCCAATCGACCAGTGTAAGGTCTCTATGA 2295 42.79 MLGNHLQNGIETAKLVWSRLPDAEDGELDEVGISKKSSGGSVESLDYEVIENYAYWEEQSQRGRLLVGYYVVVKWLFALLIGIGTGLAAVFINISVENFAGWKFALTFSIIQKSYFAGFLVYVLINLVLVFSSVYIITHFAPAAAGSGIPEIKGYLNGVDIHGVLFFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFGELLPMAIIGVIGGLLGALFNQLTLYITCWRRNFLHKKGNRVKIIEACIISFVTSIISFGLPLLRKCSQCPVVDADSGIECPRPPGMYGNYVNFYCSKDNEYNDLATIFFNTQDDAIRNLFSAKTFHEFSAQSVMFYSLAVVTYGTAVPAGQFVPGIMIGSTYGRLVGKLVVKFYQKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDTFNEGLYEEQAQLKSIPLLESRPKYQMRKIAAKDACGRRVVSFPRVVKVADVVEILRSNNHNGFPVIDHGRNGEALVIGLVLRSHLLGLLSSKEDFQHSPLPSDQRGSRPIRHNLSEFVKPASSKGLSIDDIHLNSDDSEMYIDLFPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLIEDNDDSDTVELQSTSVRSL 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7804892 7815674 - Bda016889.1 Bda03g00894 4153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00894 764 ProSiteProfiles CBS domain profile. 584 644 IPR000644 -
Bda03g00894 764 SUPERFAMILY Clc chloride channel 52 569 IPR014743 -
Bda03g00894 764 CDD ClC_6_like 43 567 - -
Bda03g00894 764 CDD CBS_pair_voltage-gated_CLC_euk_bac 588 744 - -
Bda03g00894 764 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 4 763 - -
Bda03g00894 764 SUPERFAMILY CBS-domain pair 573 744 IPR046342 -
Bda03g00894 764 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 4 763 - -
Bda03g00894 764 Gene3D Clc chloride channel 67 567 - -
Bda03g00894 764 Pfam CBS domain 698 744 IPR000644 -
Bda03g00894 764 Pfam CBS domain 581 639 IPR000644 -
Bda03g00894 764 Pfam Voltage gated chloride channel 130 547 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda03g00894 764 SMART cbs_1 700 748 IPR000644 -
Bda03g00894 764 SMART cbs_1 587 639 IPR000644 -
Bda03g00894 764 ProSiteProfiles CBS domain profile. 697 753 IPR000644 -
Bda03g00894 764 Gene3D - 568 750 IPR046342 -
Bda03g00894 764 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda03g00894 764 PRINTS Plant CLC chloride channel signature 420 436 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda03g00894 764 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda03g00894 764 PRINTS Plant CLC chloride channel signature 48 56 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda03g00894 764 PRINTS Plant CLC chloride channel signature 290 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda03g00894 764 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda03g00894 764 PRINTS Chloride channel signature 554 568 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda03g00894 764 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda03g00894 764 PRINTS Chloride channel signature 498 514 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda03g00894 764 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda03g00894 764 PRINTS Chloride channel signature 516 535 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda03g00894 764 PRINTS Chloride channel signature 463 483 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00894 Bda08g00422 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00894 Bda-Chr3:7804892 Bda06g00188 Bda-Chr6:2554598 0 dispersed
Bda03g00894 Bda-Chr3:7804892 Bda08g00422 Bda-Chr8:4274229 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00894 K05016 - jre:109005860 1309.66