Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00897 ATGACTATGGCGATGCTCTTGATCATTGTCGTTGTCGTCATCCTTATGCTGCTTCTGATTCTCATCATCATCCTCTTCGCCTGCAAGCCATGGCGCTTTCTTTCCATTTCTCGTTCGCGTACGCTCAAGGCCTCTGACCTTGAGAGGCCCCTTGTTGAGGACAATGTGGATCCTCAAGATCAAAGCAACGAACTTCCAAGAGATTATGATTTGGAGGGAGCTTTTCAATCTGATGTGCATTACCGCTCCCCCGGAGCGCATGGACTCATTTACAAACAAAGGCTTCCAGCTGCATCTCCAGAAAATTATATACTCCTGGTTCTAGATGTATATGCAGATTCTTTAGAAGACATTTCTGTTGGCCAGACACTTAAACGTCCATATGATGCACACCAGATTTCAGAAATCCAAAGATCTAGTAAAAGTGTTAAAAATGAAAAATCTGAAGAGTCCTCGGGAAAGGATATCTTACACCAAAGAAGTCGCATTTCTTTGGAGGTTATTTCTGGTCCTTCTCGCGGACTTAGATCTTTCATACATTCATCAAGTACCTCTAGGCTTCCACTAACTCTTGGAAGGGTTTCTCCTAGTGATATTGTACTAAAGGATTCAGAGGTCTCAGGGAAGCATGCATTAATAAATTGGAATTTAAATAAAATGAAATGGGAGCTGTTAGACATGGGTAGCCTGAATGGAACACTTCTTAATTCTCAACCGATACACCATCCTGACTCTGGAAGTAGGCATTGGAGTGATCCTACTGAACTTGCGAGTGGAGATATAATAACACTTGGTACAACCTCAAAAATATATGTTCATATAAATTCTCAAACTGAGGGTATAATTCCATTTGGAGTTGGTGTGGCATCAGATCCCATGGCTATGCGTCGAGGAGGAAAAAAATTGGCTATGGAAGATGTCTTTTATTATAAGTGGCCTCTTCCTGGAGTCAATCAGTTGGGAATATTTGGGATTTGTGATGGTCATGGTGGATCAGCAGCTGCCAAAAGTGCTAGCGAAATTCTACCTGAGATGGTTGCCACTATTTTATCTGATTCTCTAAAAAGGGAACGGGTATTTTCCCTATGTGACGCTTCAGATGCTTTAAGGGATGCATTTTCTCGGACAGAAGCGTGCATGAATCACGACTATGAGGGTTGTACTGCAACCTTGCTTCTGGTATGGGTGGATGGTAATGATAATTACTTTTTGCAATGCGCAAATGTTGGCGATTCTGCTTGTGTTTTAAGTGTTGATGGGAAACAAGTAAAGATGACTGAAGATCATAGAGTTACTAGCTACTCAGAACGACAACGAATTGAAAAATTAGGAAAGCCATTGAAAGATGGGGAGACACGATTATGTGGTTTGAACCTTGCACGTATGCTTGGAGACAAATTTCTGAAACAACAGGATAATCGCTTTAGTTCAGAGCCTTACACAAGTCAGGTTGTACATATTGATCAAGCAAGCAGGGCATTTGCACTCATGGCAAGTGATGGCTTTTGGGATGTCATCAGCGTCAAGAAGGCAATCCAGCTAGTTCTTCAGGCTCAGGAGAGATACTCTACAGATTCAGAAAATTTGGCGAAGAAGATAGCTAATTTTTTGTTGGCCGAGGCTAGAATGCTACGAACAAAGGATAATACCACTATAATTTACTTAGATTTTGACTCCTCTCATAGCAACTCTTGTAAAGTTGAATCATAA 1710 41.35 MTMAMLLIIVVVVILMLLLILIIILFACKPWRFLSISRSRTLKASDLERPLVEDNVDPQDQSNELPRDYDLEGAFQSDVHYRSPGAHGLIYKQRLPAASPENYILLVLDVYADSLEDISVGQTLKRPYDAHQISEIQRSSKSVKNEKSEESSGKDILHQRSRISLEVISGPSRGLRSFIHSSSTSRLPLTLGRVSPSDIVLKDSEVSGKHALINWNLNKMKWELLDMGSLNGTLLNSQPIHHPDSGSRHWSDPTELASGDIITLGTTSKIYVHINSQTEGIIPFGVGVASDPMAMRRGGKKLAMEDVFYYKWPLPGVNQLGIFGICDGHGGSAAAKSASEILPEMVATILSDSLKRERVFSLCDASDALRDAFSRTEACMNHDYEGCTATLLLVWVDGNDNYFLQCANVGDSACVLSVDGKQVKMTEDHRVTSYSERQRIEKLGKPLKDGETRLCGLNLARMLGDKFLKQQDNRFSSEPYTSQVVHIDQASRAFALMASDGFWDVISVKKAIQLVLQAQERYSTDSENLAKKIANFLLAEARMLRTKDNTTIIYLDFDSSHSNSCKVES 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7832645 7838235 - Bda016892.1 Bda03g00897 4156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00897 569 SUPERFAMILY SMAD/FHA domain 162 273 IPR008984 GO:0005515
Bda03g00897 569 ProSitePatterns PPM-type phosphatase domain signature. 322 330 IPR000222 GO:0043169
Bda03g00897 569 Gene3D - 158 289 - -
Bda03g00897 569 CDD PP2Cc 284 557 IPR001932 -
Bda03g00897 569 CDD FHA 162 276 IPR000253 GO:0005515
Bda03g00897 569 MobiDBLite consensus disorder prediction 140 156 - -
Bda03g00897 569 Pfam Protein phosphatase 2C 293 542 IPR001932 -
Bda03g00897 569 Pfam FHA domain 190 265 IPR000253 GO:0005515
Bda03g00897 569 PANTHER PROTEIN PHOSPHATASE 2C 35 568 IPR015655 GO:0004722|GO:0006470
Bda03g00897 569 PANTHER PROTEIN PHOSPHATASE 2C 70 35 568 - -
Bda03g00897 569 SMART PP2C_4 279 555 IPR001932 -
Bda03g00897 569 SMART FHA_2 188 240 IPR000253 GO:0005515
Bda03g00897 569 ProSiteProfiles PPM-type phosphatase domain profile. 285 557 IPR001932 -
Bda03g00897 569 SUPERFAMILY PP2C-like 299 558 IPR036457 -
Bda03g00897 569 Gene3D - 290 565 IPR036457 -
Bda03g00897 569 ProSiteProfiles Forkhead-associated (FHA) domain profile. 189 240 IPR000253 GO:0005515
Bda03g00897 569 MobiDBLite consensus disorder prediction 136 156 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00897 Bda08g00230 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00897 Bda-Chr3:7832645 Bda03g00114 Bda-Chr3:1021779 1.96E-24 dispersed
Bda13g00082 Bda-Chr13:1053871 Bda03g00897 Bda-Chr3:7832645 2.51E-06 transposed
Bda03g00897 Bda-Chr3:7832645 Bda08g00230 Bda-Chr8:2296955 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00897 K01090 - mnt:21390736 778.474