Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00901 ATGGAGCAAATCACAGCAAACGACGGATCGCTTCGGCCTCCTTTTCTCTCCAAAGATCTCCATCTATATCCCTACCATCAATTTCAAAACCCCAAGCAGAATTATTCCGATGAGAAGTATTCTGGTGGCGAAAGCAAAGAGCTTGGCGGAAGTGACGCCGGAGACGGAGAGATTATCAAAAGATCACGCGGCCGACCTGCTGGTTCTAAGAATAAACCTAAGCCACCGATCGTAATCACACGCGACAGTGCAAACGCTCTCCGATCACTTGTCATGGAGATCGCTGCCGGTTCCGACGTGATGGAGACGATGTCAGACTTCGCACGCCGGAGACAGCGGGGGGTTTGTATTTTGAGCGGAGGTGGGACAGTAAGCGACGTCACTTTAAGGCAGCCAGCTGTTACTTTACGCGGTGAATTCGAGATTCTTTCTTTGTCAGGATCGTTTTTGCCGCCGCCGGCTCCTGCCGAGGCCTCCGGACTAGCTGTGTATTTGGCAGGAGGACAAGGGCGAGTGGTCGGAGGGTGTGTCGTCGGACCACTTTTAGCTTCCACCCCGGTTGTTATAATGGCGGCTACTTTTGGAAACGCTGCATACGAGAGGCTTCCAATAGAGGAAGATGAATCGCCGATGAAAATCCAGGCGAGCAATCCCGTCGGAAAAGGGCAGCAGCAAAATTTACTAGATCCAAACACTTCTCTATTTCATGGGGTTCATCAAAATCTTCTAAATCCGTATGAATTACCTTCTGAAGCATTCTTGCTTACAAATCGCCCTTCATATTAG 786 50.0 MEQITANDGSLRPPFLSKDLHLYPYHQFQNPKQNYSDEKYSGGESKELGGSDAGDGEIIKRSRGRPAGSKNKPKPPIVITRDSANALRSLVMEIAAGSDVMETMSDFARRRQRGVCILSGGGTVSDVTLRQPAVTLRGEFEILSLSGSFLPPPAPAEASGLAVYLAGGQGRVVGGCVVGPLLASTPVVIMAATFGNAAYERLPIEEDESPMKIQASNPVGKGQQQNLLDPNTSLFHGVHQNLLNPYELPSEAFLLTNRPSY 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7859228 7860013 + Bda016896.1 Bda03g00901 4160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00901 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 208 - -
Bda03g00901 261 Gene3D - 87 216 - -
Bda03g00901 261 MobiDBLite consensus disorder prediction 27 79 - -
Bda03g00901 261 ProSiteProfiles PPC domain profile profile. 84 217 IPR005175 -
Bda03g00901 261 MobiDBLite consensus disorder prediction 39 64 - -
Bda03g00901 261 CDD DUF296 88 153 IPR005175 -
Bda03g00901 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 261 IPR014476 GO:0003680
Bda03g00901 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 194 IPR005175 -
Bda03g00901 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 37 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00901 Bda-Chr3:7859228 Bda13g00424 Bda-Chr13:5179679 1.75E-90 dispersed
Bda03g00901 Bda-Chr3:7859228 Bda03g00910 Bda-Chr3:7975880 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00901 - - jre:108980480 325.479