Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00936 ATGGGTTGTTTTCCTTGTTTTGATTCGAGGGAGGAAGAAAAACTGAATCCGGAGAAAGAAAGTGACGATAGAAAGAGAGCGATACCGACGCTTCCCACTAACATTCCCCGATTGCCTTCTGGAGTGGAGAAACTAAAATTAAGAAGTAATGGTGGGTCGAAAAGAGAAACTCAGGCTCTAGTCGTTGCAGTTAAACAGTTGGATCGAAATGGTCTTCAAGGGAATCGAGAATTTCTAGTGGAGGTGCTCATGCTTAGCCTTCTTCATCACTCAAACTTAATGAATTTAATTGGTTACTGTGCTGATGGGGATCAGCGGCTTCTTGTTTACGAGTTCATGCCTTTGGGATCATTAGAAGATCATCTTCATGACATTCCACCTGATAAGGAACCCCTAGATTGGAACACGAGGATGAAAATAGCCGCCGGTGCAGCCAAAGGTTTGGAATACCTGCACGACAAAGCAAGCCCTCCCGTTATTTATAGAGATTTCAAGTCGTCCAACATATTGCTAGATGAAGGATTCCACCCGAAACTTTCAGATTTTGGTCTTGCCAAGCTCGGTCCTGTCGGAGATAAATCGCACGTTTCTACTCGAGTTATGGGGACTTACGGCTATTGTGCACCCGAATACGCAATGACTGGACAGCTCACGGTCAAATCGGATGTCTACAGCTTCGGTGTAGTCTTCTTGGAGCTTATTACTGGCCGGAAAGCGATCGATAGCACCCGACCCCACGGAGAACAGAATCTCGTCACTTGGGCTAGGCCTTTGTTCAACGACAGAAGAAAATTTTCGAAACTGGCCGACCCTCTGTTGCAGGGGAGGTATCCAATGCGGGGGCTCTACCAGGCTCTGGCAGTGGCTTCTATGTGCATCCAGGAGCAGGCTGCCTCTCGACCTTTAATTGGAGATGTCGTTACGGCCCTTTCTTACCTAGCAAACCAGGCATACGATGGGAGTAGTGGGTACAGAGGGATTGTCGAAAAGGACGACAAGAGGAGTAGAGACGAGAGAGGGAGGATATTGAAGAACGAGGAAGGAGGCAGCTCCGGACGCAAATGGGATTTGGAGGGATCCGAGAAAGAAGACTCCCCGAAAGAGGCTGGGAGGATTACAACGAGGGATTTGGAGAGAGAACGGGCTGTTGCTGAAGCCAAGATGTGGGGCGAGAATTGGCGAGAAAAGAGACGGCAAAGTGCACAAGGCAATTTCGATGGGGCGAATGGATAG 1233 48.5 MGCFPCFDSREEEKLNPEKESDDRKRAIPTLPTNIPRLPSGVEKLKLRSNGGSKRETQALVVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLMNLIGYCADGDQRLLVYEFMPLGSLEDHLHDIPPDKEPLDWNTRMKIAAGAAKGLEYLHDKASPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPLLQGRYPMRGLYQALAVASMCIQEQAASRPLIGDVVTALSYLANQAYDGSSGYRGIVEKDDKRSRDERGRILKNEEGGSSGRKWDLEGSEKEDSPKEAGRITTRDLERERAVAEAKMWGENWREKRRQSAQGNFDGANG 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8313653 8316450 - Bda016934.1 Bda03g00936 4195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00936 410 PANTHER OS07G0668900 PROTEIN 56 404 - -
Bda03g00936 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Bda03g00936 410 SUPERFAMILY Protein kinase-like (PK-like) 60 310 IPR011009 -
Bda03g00936 410 Gene3D Transferase(Phosphotransferase) domain 1 114 327 - -
Bda03g00936 410 MobiDBLite consensus disorder prediction 325 401 - -
Bda03g00936 410 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 56 404 - -
Bda03g00936 410 MobiDBLite consensus disorder prediction 8 27 - -
Bda03g00936 410 ProSiteProfiles Protein kinase domain profile. 1 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00936 410 Gene3D Phosphorylase Kinase; domain 1 50 113 - -
Bda03g00936 410 Pfam Protein tyrosine and serine/threonine kinase 54 242 IPR001245 GO:0004672|GO:0006468
Bda03g00936 410 MobiDBLite consensus disorder prediction 324 410 - -
Bda03g00936 410 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00936 Bda-Chr3:8313653 Bda13g00167 Bda-Chr13:2136918 0 dispersed
Bda03g00936 Bda-Chr3:8313653 Bda01g00267 Bda-Chr1:27218381 1.56E-154 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69553 PF07714 PK_Tyr_Ser-Thr 7.50E-38 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00936 K13430 - pvy:116140735 714.531