Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00963 ATGGTGGGCCATAAAAGAGGCTCTTGCGCTGTTAATCAAGAAGATGATTTCATGGCCCCTACAAGCAAACGACACAAGGCTGGTGTTTCTCTCTCTACAAAGGAGAGAAAAGAGAGGCTGAATGGAAAGATCATAGCTCTTCAACAGCTCGTTTCACCGTACGGAAAGACGGATACAGCTTCTGTTCTGCTGGAGGCCATCGTGTTGAGTGCTCCGTATCTCCATGGCTCTCCGACTTTGAAGATGCAGGAGATAGAGATAGAGACTTACAGATACAGCCTAAGAATCAGAGGTTTATCCATTGTTCCTCTCTGCTTTACGGAAGGAGTAGTCTGCAGCAATGGAGCAGATATATGGGCTCCTATTTACATTAAATCCCCTGTATTTCACGACCCCATTTCATCACTTCACTGA 414 45.65 MVGHKRGSCAVNQEDDFMAPTSKRHKAGVSLSTKERKERLNGKIIALQQLVSPYGKTDTASVLLEAIVLSAPYLHGSPTLKMQEIEIETYRYSLRIRGLSIVPLCFTEGVVCSNGADIWAPIYIKSPVFHDPISSLH 137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8714799 8715580 - Bda016972.1 Bda03g00963 4222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00963 137 CDD bHLH_AtbHLH_like 30 67 IPR045239 -
Bda03g00963 137 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 117 - -
Bda03g00963 137 PANTHER TRANSCRIPTION FACTOR BHLH154 1 117 - -
Bda03g00963 137 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 23 67 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00963 Bda13g00540 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00963 Bda-Chr3:8714799 Bda13g00540 Bda-Chr13:6409167 1.89E-38 dispersed
Bda03g00963 Bda-Chr3:8714799 Bda12g00875 Bda-Chr12:39446790 1.63E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00963 - - pper:18793757 153.68