Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00986 ATGTCTGAATCAGATCGTTACAGACCTAGATTGGTGATCAAGAAAGTTTTGGCTAAGCTTCAGCAGGAGGGAGATGGGGCTGTTGTTAGGAGAGGCATTGGAAGGAGTGATTTGAAGAACTTGGATCCATTCCTATTGTTGGATGACTTCTCAGTGGGACCCCCTGCTGGATTTCCAGATCATCCGCACAGAGGTTCTAAATTTATCACCAGAGGAGGGATTACCCATCAAGACTTTGCAGGGCACAAGGGTACGATCTGGACAGGAGATGTGCAGTGGATGACGGCAGGTAGAGGGATCGTCCACTCCGAAATGCCAGCTGGTGAAGGAAGCCAAACTGGTTTGCAGCTTTGGATCAACTTATCATCCAAAGACAAAATGATTGAACCAAGATATCAAGAGCTCCTAAGTGATGAAATCCCAAGATCGGAAAAAGACGGAGTCGAAGTTCGAGTTATCGCCGGAGAATCAATGGGTGTACAGTCTCCGGTCTACACTAGAACTCCAACTATGTATCTTGATTTTACTCTAAAACCAAGAGCTCAAATGCATCAAAATATCCCAGAATTGTGGAACTCATTTGTGTATATAATTGAAGGAGAGGGTGTTTTTGGTACGCCAAATTCATCACCGGTAGCTGCTCATCACGTTCTCGTCTTGGGACCCGGAAATGGTTTAAGTGTGTGGAATAGGTCTTCAAAGACTCTGATATTTGTTTTGATTGCTGGGCAGCCATTGAACGAGTCTGTGGTTCAACATGGACCGTTTGTGATGAACACTCAAGATGAAATTGATCAAGCCATTGAAGACTATCATTTCTGCAAAAATGGGTTTGAAATGGCCAAGTATTGGAGATCTCAATGA 864 44.1 MSESDRYRPRLVIKKVLAKLQQEGDGAVVRRGIGRSDLKNLDPFLLLDDFSVGPPAGFPDHPHRGSKFITRGGITHQDFAGHKGTIWTGDVQWMTAGRGIVHSEMPAGEGSQTGLQLWINLSSKDKMIEPRYQELLSDEIPRSEKDGVEVRVIAGESMGVQSPVYTRTPTMYLDFTLKPRAQMHQNIPELWNSFVYIIEGEGVFGTPNSSPVAAHHVLVLGPGNGLSVWNRSSKTLIFVLIAGQPLNESVVQHGPFVMNTQDEIDQAIEDYHFCKNGFEMAKYWRSQ 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8923167 8924805 - Bda017000.1 Bda03g00986 4245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00986 287 SUPERFAMILY RmlC-like cupins 10 285 IPR011051 -
Bda03g00986 287 CDD cupin_pirin_C 169 245 - -
Bda03g00986 287 Gene3D Jelly Rolls 141 246 IPR014710 -
Bda03g00986 287 PIRSF Pirin 8 285 IPR012093 -
Bda03g00986 287 Gene3D Jelly Rolls 23 272 IPR014710 -
Bda03g00986 287 Pfam Pirin 30 119 IPR003829 -
Bda03g00986 287 PANTHER PIRIN-LIKE PROTEIN 8 287 - -
Bda03g00986 287 PANTHER PIRIN-RELATED 8 287 IPR012093 -
Bda03g00986 287 Pfam Pirin C-terminal cupin domain 172 276 IPR008778 -
Bda03g00986 287 CDD cupin_pirin_N 27 121 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00986 Bda-Chr3:8923167 Bda04g01258 Bda-Chr4:63132077 6.26E-37 dispersed
Bda13g00758 Bda-Chr13:9166726 Bda03g00986 Bda-Chr3:8923167 1.09E-36 transposed
Bda03g00986 Bda-Chr3:8923167 Bda08g00146 Bda-Chr8:1369530 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00986 K06911 - mnt:21404588 496.123