Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00997 TTGTACATGGAAGATGATTGGGATCTGCAAGCGGTGGTTAGAGGCTACGCCGCCGCCACCATAACTAAATATTGTTCAACTTCTTCCGCAGCCGTTTCTCATGGCTCCGACCAACCTCCTTCTAACTTCCTCTCTCATTCTCTCCCTTTTGAGCCGAGAAATGATATGGAGGAGTTGCAGCAGCTCTGCGACCCTTTCTTCCCCAAATCTCACACCCGCCTGGTTTCTTCTATCTCTGCTCCTAACGTTCGAACGGAGCAGAAACAAGTCACCCAATTGCAGTCTCCACGATCCAAAAGACGGAAAAATCTGCTGAAAAAAGTGTGTCGAGTTACAGCAGAGAGCCTCTCTTCCTCTGTATGGGCTTGGCGTAAGTATGGACAGAAGCCCATCAAAGGCTCTCCATATCCAAGAGGATATTACAGATGTAGCAGCTCAAAGGAGTGTCTAGCCCGGAAACAAGTGGAGCGGGACAGATCTGACTCGGGAATGTTCATAGTCACATACACGGCAGAGCACAATCATCCGGCGCCGACACACCGGAACTCACTCGCCGGTTCGACCAGGCAGAAGCCTTCTACTTCGAAAACCGTCACTGGCGGCGAGCAGAACAGAGCCCAAGAAACAGAGCTTGCTTGCTTTTCATCCTCCGCGGAAGACGGGGTTGTTCGCCGGAGCCCAGAAACGGAAAGGAAGGGAGAAAAAGAATACTTACTAGAAGACGAAGAAGACGAACAAGGGACGTGGGGAGATACCATGGCGGACGACGATTTCTTCGTGGGTTTGGAGGATCTCGACGATGACGACGCCGGAGACTATTTCCCAGAGAACTACTCGGAAGATCTAGATCTTAGTTGGATACCCAACAATTCTACAACAGCCGCTCGCGGTAGCTGA 897 51.06 LYMEDDWDLQAVVRGYAAATITKYCSTSSAAVSHGSDQPPSNFLSHSLPFEPRNDMEELQQLCDPFFPKSHTRLVSSISAPNVRTEQKQVTQLQSPRSKRRKNLLKKVCRVTAESLSSSVWAWRKYGQKPIKGSPYPRGYYRCSSSKECLARKQVERDRSDSGMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTSKTVTGGEQNRAQETELACFSSSAEDGVVRRSPETERKGEKEYLLEDEEDEQGTWGDTMADDDFFVGLEDLDDDDAGDYFPENYSEDLDLSWIPNNSTTAARGS 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9079697 9080765 + Bda017013.1 Bda03g00997 4256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00997 298 MobiDBLite consensus disorder prediction 223 238 - -
Bda03g00997 298 SMART WRKY_cls 117 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda03g00997 298 MobiDBLite consensus disorder prediction 239 254 - -
Bda03g00997 298 SUPERFAMILY WRKY DNA-binding domain 116 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda03g00997 298 MobiDBLite consensus disorder prediction 174 254 - -
Bda03g00997 298 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 87 297 IPR044810 GO:0003700
Bda03g00997 298 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 74 IPR044810 GO:0003700
Bda03g00997 298 MobiDBLite consensus disorder prediction 175 214 - -
Bda03g00997 298 Gene3D WRKY domain 100 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda03g00997 298 PANTHER WRKY TRANSCRIPTION FACTOR 22-LIKE 87 297 - -
Bda03g00997 298 PANTHER WRKY TRANSCRIPTION FACTOR 22-LIKE 3 74 - -
Bda03g00997 298 Pfam WRKY DNA -binding domain 121 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda03g00997 298 ProSiteProfiles WRKY domain profile. 112 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00997 Bda11g00236 CCT
Bda03g00997 Bda13g00357 CCT
Bda03g00997 Bda11g00236 ECH
Bda03g00997 Bda13g00357 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00997 Bda-Chr3:9079697 Bda13g00357 Bda-Chr13:4459365 3.88E-84 dispersed
Bda14g00771 Bda-Chr14:5895742 Bda03g00997 Bda-Chr3:9079697 1.53E-28 dispersed
Bda03g00997 Bda-Chr3:9079697 Bda11g00236 Bda-Chr11:2806716 9.92E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15713 PF03106 WRKY 2.80E-23 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00997 K13425 - jre:108998106 269.24