Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01016 ATGGCCTTTCTCTACTGGTCCCACCCCGGCGGTCCTGCTTGGGGACATTACTACTGCTCCAGGTGGAAGAGACCTTCGTCTTTGATCCCCGGCCCGAGAGGGTTTCCTCTGGTCGGCAGTATGAGTTTAATGGCTAACCTAGCTCACCATAAGATTGCTGCCATGTCTGAAGCTTGTGGAGCTAAGAGGCTGATGGCGTTTAGCCTTGGCCACACGAGGGTTATTGTGACATGCAATCCGGACGTAGCCAGAGAAATTTTGAGTAGTTCTGTGTTTGCTGATCGGCCGGTGAAGGAGTCGGCTTACAGTTTAATGTTTAACAGAGCTATAGGGTTTGCTCCTTATGGAGTTTACTGGCGAACTCTACGCCGAATCGCGTCGAACCATCTTTTTTGTCCGAAACAAATCAAGAGCTCTGAAGCTCAGAGAAGTTTGATAGCTTCTCAAATGGCGGCTTTGTTTAAAAGTAAAAAAGATGACAGCTTTCCCGTCAGAGAAGTTCTGAAGCGAGCTTCTCTGAATAACATGATGTGTTCTGTATTTGGACGAATATACAGTCTGGATTCCATTTCCGACGAGGTTGAGGAGCTGAAGAATTTAGTCGACGAAGGGTACGAGCTACTCGGTTTACTGAACTGGTCAGACCATCTTCCATGGTTAGCTGATCTTGACCCTCAGAGAATCCGGCTGAAGTGCTCAAAACTGGTCCCTAAAGTGAACCACTTCGTCGGCCGAATCATTGCCGGCCGTCGAACTCAGTCAAGTGAGAAAATCGGAGACTTCGTCGACGTTTTGCTCTCTCTCCGACATCCTGACACACTCTCTGATCCCGACATGATCGCCGTTCTTTGGGAGATGATATTTCGGGGAACTGATACAGTGGCGGTGTTAATCGAGTGGATCCTGGCGAGGTTAGTACTCCACTCTGATGTTCAATCAAGGGTCCACAATGAGCTTGACAAGGTGGTTGGAAGATCACGTGCCGTCCTAGAGTCCGACATTTCCTCGTTGATATATCTGACGGCTGTCGTTAAAGAAGTACTGAGGCTACATCCACCGGGCCCACTTTTGTCGTGGGCCCGCCTTGCAATTACAGATACGACCGTTGATGGACACCACGTACCAAAAGGAACAACGGCCATGATTAACATGTGGTCGATTACGCGGGACCCACAAGTATGGTCGGACCCAGTCGAGTTCATCCCAGATAGATTTTTGAGTCAGGGGGACGTTGAATTCTCCGTGATGGGTTCGGATCTCAGGCTTGCTCCATTCGGGTCTGGTAGAAGGGTTTGTCCCGGTAAGAATTTGGGTATGGCGACTGTTACCTTTTGGATCGCGTCTCTTCTGCACGAGTTTGAATGGCTACCGTCTGATCAGAATAAAGTTGACCTATCAGAGGTGTTAAAACTCTCCTCCGAGATGGCAAGTCCTTTGACCGTTAAAGTTCAGCCGAGGCGTATTTTAAGTTAA 1473 48.88 MAFLYWSHPGGPAWGHYYCSRWKRPSSLIPGPRGFPLVGSMSLMANLAHHKIAAMSEACGAKRLMAFSLGHTRVIVTCNPDVAREILSSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIASNHLFCPKQIKSSEAQRSLIASQMAALFKSKKDDSFPVREVLKRASLNNMMCSVFGRIYSLDSISDEVEELKNLVDEGYELLGLLNWSDHLPWLADLDPQRIRLKCSKLVPKVNHFVGRIIAGRRTQSSEKIGDFVDVLLSLRHPDTLSDPDMIAVLWEMIFRGTDTVAVLIEWILARLVLHSDVQSRVHNELDKVVGRSRAVLESDISSLIYLTAVVKEVLRLHPPGPLLSWARLAITDTTVDGHHVPKGTTAMINMWSITRDPQVWSDPVEFIPDRFLSQGDVEFSVMGSDLRLAPFGSGRRVCPGKNLGMATVTFWIASLLHEFEWLPSDQNKVDLSEVLKLSSEMASPLTVKVQPRRILS 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9375205 9376819 - Bda017034.1 Bda03g01016 4275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01016 490 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 Pfam Cytochrome P450 30 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 SUPERFAMILY Cytochrome P450 29 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PANTHER CYTOCHROME P450 78A6 1 488 - -
Bda03g01016 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Bda03g01016 490 Gene3D Cytochrome P450 17 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g01016 490 PANTHER CYTOCHROME P450 78A7-RELATED 1 488 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01016 Bda-Chr3:9375205 Bda09g00643 Bda-Chr9:9669577 0 dispersed
Bda14g00410 Bda-Chr14:2911025 Bda03g01016 Bda-Chr3:9375205 1.61E-14 transposed
Bda03g01016 Bda-Chr3:9375205 Bda08g00090 Bda-Chr8:818031 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01016 K20619 - tcc:18613923 762.296