Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01158 TTAAGTATAATGAGTAACGTTAATGTAGTTTCTATGCTTAACGGGACCAACTATAGAGCATGGAAAAAGAACGTTATGATTGTTCTTGGGTGCATGGATCTAGACATTGCACTTAGGGTCACACGCTTCCCAGCTCTTTCAACATCAAGTACCTTTGATGATAAAAGGAGGTGGAAAAGTGAAAATGATTACTTAATGACATTCATTTCAGTTACTAAATGCAATCGAGCGGAGATTGCGTTGTCTAAGCTTCGAGATAACAAAAACGGCTTCGATGTTGTAATTAGCGATGTCCACATGCCAGATATGGATGGGTTTAAGCTCTTAGAACACATTGGCCTAGAAATGGACTTGCCCGTTATCATGATGTCAGCTGATGAAGGGAAAGATGTCGTCATGAAGGGAGTGACTCACGGTGCTTGTGATTATCTAATAAAACCCGTTCGAATTGAGGCTTTGAAGAACATATGGCAACATGTAGTGCGGAGGAAGAAGAATGAGTGGAAGGATCTAGAACAATCTGGAAGTGTGGAAGATGGCGATAGGCTACAGAAAAATTGTGACGAAGTGGACTACTCATCCTCGGCAAATGAAGGAAATTGCAAAAACTCAAAGAGGAGGAAGGACGACGAAGAAGAAGCAGAGGAACGAGAAGATTCATCCACATTGAAGAAGCCACGTGTTGTTTGGTCAGTCGAGCTTCATCAACAGTTTGTTGCTGCTGTTAATCAACTAGGCATTGAAAAGGCTGTTCCTAAGAAAATTTTGGAGTTGATGAATGTTCTGGGACTCACTCGAGAAAATGTTGCGAGTCATCTTCAGAAATATCGTTTGTATCTGAGAAGGCTAAGTGGAGTTTCACCACACCCGAGTAATTTGAACAACTCTTTCATGACCCCACAAGAAGCAATGTTCGGACCGATTTCAGCACTCAACGGGATTGATCTTCAGGCACTTGCTGTTGCTGGAAAACTCACACCCCAAAGTCTTGCCTCACTTCAAGCTTCCGGGCTTGGTAGATCTTCACCGAAATCCAGCATAATTTCTGATCAGAGGAATATTTTTAGCTTTGAAAATCCAAAATTAAGATTTGGTGATGCCCAGCTTCAGCATGTCAACAGTAGTAAACCAATAAATTTACTCCATGGAATCCCCACCACTATGGAAGCAAAGCAGCTTGCCAATTTGAGCCAATCTGTACAATCTCATGGAGGCATGAACATGCAAGGAAACATCCATGGAGGCCAAACCAACTCTTTGTTAACGCAGATGGCGCAACCTCAATCATCAATCAGGCAGTCGAACAGAATACCTGGCGGGGTTTTGACAAACAATCTACCTCCACCGGAAACTTCTATGTTCAATTTTCCAATGAACCAAACAGCCGACTTTCCAGGAAATAGTTTGCCTTTTCAAACAGCTCCAGCTATTGTTAATCCTCCATCTAAAGGCCCATTCCTTGAAGAATCAAATCTAGAAATAAAACAATCGGGAAGATTTGTGTCAAATTATGATGTATTTGATGACTTGCACGAACAAAAATCTCGGGATTGGAACTTGCAGCCTCCCAGCTTGAACTTCAATCCGTCTCATGGGGACCTGGATATCTCTTCTTCAGGTTTATATAATCAAAACTTTACCAATGGCCCAAGGATTATACAGGAAATTAATGTTTCTGCGACTCGGCATGAGAATGGACAGATTGGTGGACAGCAACTGAATTCTATACTTTTTGACAATCCAGTAAAAGTCAAAGCTGAGACAATTCCAGATCCGAGTTGTGTTTTATTTACGGAAAACTTCGACGGTGATGATCTAATGAGTACCCTTTTGAGACAAGTTAGTTTCCTGCCACTTTTTTTTTTTAAAATTATTATTATTATTATTGTTTTTTGTGTTTTACTTCCTTGGAAAATTTACTCAGATTCTTTTTATTTCCAGCAACAAGAAAATTTCGGACCCGGCTCCACCGAAAGCGAATACGACTTCGACAGGTATTCGATGGATAATATTCCCGTTTAA 2022 40.7 LSIMSNVNVVSMLNGTNYRAWKKNVMIVLGCMDLDIALRVTRFPALSTSSTFDDKRRWKSENDYLMTFISVTKCNRAEIALSKLRDNKNGFDVVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADEGKDVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRRKKNEWKDLEQSGSVEDGDRLQKNCDEVDYSSSANEGNCKNSKRRKDDEEEAEEREDSSTLKKPRVVWSVELHQQFVAAVNQLGIEKAVPKKILELMNVLGLTRENVASHLQKYRLYLRRLSGVSPHPSNLNNSFMTPQEAMFGPISALNGIDLQALAVAGKLTPQSLASLQASGLGRSSPKSSIISDQRNIFSFENPKLRFGDAQLQHVNSSKPINLLHGIPTTMEAKQLANLSQSVQSHGGMNMQGNIHGGQTNSLLTQMAQPQSSIRQSNRIPGGVLTNNLPPPETSMFNFPMNQTADFPGNSLPFQTAPAIVNPPSKGPFLEESNLEIKQSGRFVSNYDVFDDLHEQKSRDWNLQPPSLNFNPSHGDLDISSSGLYNQNFTNGPRIIQEINVSATRHENGQIGGQQLNSILFDNPVKVKAETIPDPSCVLFTENFDGDDLMSTLLRQVSFLPLFFFKIIIIIIVFCVLLPWKIYSDSFYFQQQENFGPGSTESEYDFDRYSMDNIPV 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12761839 12771884 + Bda017219.1 Bda03g01158 4417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01158 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 70 429 - -
Bda03g01158 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 450 601 - -
Bda03g01158 673 Pfam Response regulator receiver domain 70 155 IPR001789 GO:0000160
Bda03g01158 673 ProSiteProfiles Response regulatory domain profile. 41 161 IPR001789 GO:0000160
Bda03g01158 673 MobiDBLite consensus disorder prediction 201 222 - -
Bda03g01158 673 SUPERFAMILY CheY-like 70 168 IPR011006 -
Bda03g01158 673 Gene3D - 57 178 - -
Bda03g01158 673 MobiDBLite consensus disorder prediction 170 222 - -
Bda03g01158 673 SMART REC_2 52 157 IPR001789 GO:0000160
Bda03g01158 673 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 281 IPR017930 -
Bda03g01158 673 MobiDBLite consensus disorder prediction 170 188 - -
Bda03g01158 673 SUPERFAMILY Homeodomain-like 222 282 IPR009057 -
Bda03g01158 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 70 429 IPR045279 GO:0009736
Bda03g01158 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 450 601 IPR045279 GO:0009736
Bda03g01158 673 Gene3D - 222 284 - -
Bda03g01158 673 CDD REC_typeB_ARR-like 71 161 - -
Bda03g01158 673 Pfam Myb-like DNA-binding domain 227 277 IPR001005 -
Bda03g01158 673 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 225 278 IPR006447 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01158 Bda08g00304 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01158 Bda-Chr3:12761839 Bda11g00187 Bda-Chr11:2406265 5.44E-106 dispersed
Bda07g01879 Bda-Chr7:36209687 Bda03g01158 Bda-Chr3:12761839 1.18E-49 transposed
Bda11g00695 Bda-Chr11:6921384 Bda03g01158 Bda-Chr3:12761839 4.26E-24 wgd
Bda03g01158 Bda-Chr3:12761839 Bda08g00304 Bda-Chr8:3176640 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15730 PF00072 Response_reg 5.50E-16 CL0304 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01158 - K14491 qlo:115994534 704.516