Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01166 TTGTTGGAGGAAATTTCTACATTTGACAATGTCAGTGGATCAAATGGGAGAAATAACTCAAATCATTTTGGTTTGCTAAATAGCTCCTACGTATCTACTATGGTTAGTCAATTAAATTCATATGCGCATAATGGGAATACCATTGCAATGGCCTCCAATGTACCCGTAGATATTATGGCCAACGAGGGGTTGCAAATTGAGGATAGCTTTGGGCAGTGGATAAATGATATTGTGTCTGACTTTCCTGGTTCTGTAGATGATCAGTCCTCCATTTTACCTCATTATGATGAATTTACCTCTACTACGATAAATCATCATCCATCTTCTGTGCCAGAGCAAATGTTTATCATAACCGATATCTCTCCTGGATGGGCATTTACTGCAGAAAAAACCAAGATTTTAATAACTGGATTTTTTCACGAAGAGTTTGCTCATCTGGCTAAGTCCAATTTGTTGTGTCTCTGTGGCGATGTTTGTATTCCTACAGAAGTCGTTCAACTTGGAGTTTATCGTTGCCTGGTACCTCCACATCCACCTGGATGTGTAAATATCTATCTCAGTTTAGATGGTCATAAACCAATCAGCCAAGTTATGAATTTTGAGTATCGCAACCAATTACTGGATGGTTCAGGAGTTTCTTTAGACGAAAAGGAAAGGTGGGAGGAGTTTGAAGTTCAGATGCGGCTTCTTGGTTTGCTTTTCTCTACATCGAAGAGCCTGAACATTCTGTCTGGTAAAGTATCACAAAATGCCCTAAAGGTAGCGAGAAACTTTGCTCAAAAAACATCTAACATTGCTAATAGTTGGGCTTATTTGCACAAGTCAATTCAAGATAACAAAATTTCGTTTCCTCTAGCAAAAGATGGCCTATTGGAACTTATTTTAAGGAACAGAGTAAGGGAATGGCTGTTAGAAAGGATTATTGAAGGCTCCAAGAAGAGCACTGAATTTGACGCTTACGGTCAAGGAGTAATACACTTGTGTGCCATCCTGGGATATTCATGGGCTATACAATTATTTGCTTGGTCAGGTTTAACATTGGATTTTCGGGACAAATCTGGATGGACAGCTCTTCACTGGGCAGCATATTGTGGAAGGGAGAAAATGGTTGCAGTTCTTCTATATGCTGGAGCAAAGCCAAACTTGGTTACAGACCCAACCTCAGAAAATCCTGGGGGATGCACAGCTGCTGATCTTGCATATGTAAAGGGTCATGATGGCTTGGCTGGCTATCTTTCAGAAAAGGCATTAGTAGCTCATTTCCAGGAAATGAGTATAGCTGGAAATATAAGTGGTACACTGCAAATCAACACAACTGAGAGGGAGAGTGTAAACCCTGAGAATCTCAGTGAGGAGCAGCTACAAACGGAAGGTACTTTGGCAGCCTACAGAACGGCTGCCGATGCAGCAGCACATATAAATGCTGCATTTCGCGAGCATTCTTATAAGCAAAGAACGAAAGAAGTTCAGGTTTCTACTCCAGAGATGGAAGCGCGCAATATTATTGCAGCTATGAAAATTCAGCATGCATTCCGCAATTATGAAATGCGACGAAAAATGGCAGCTGATGCTCATATACAACAGAGATTTCGTACTTGGAAAATGCGTCAAGATGTCCTTAACATGCGATGTCAAGCTATAAGAGTTCAAGCTGTATTTCGAGGCTTCCAAGTACGGAGGCATTACCGTAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGCTATACTACGGTGGCGCTTAAAGAGAAAAGGCTTTCGTGGGCTTCAGGTTGAACCTGTGGAACCAATTGCAGAGGTAAGACAGGAAAGTGATACCGAGGAAGACTTTTACCGTACAAGCCAGAAACAAGCAAGTGAGCGTGTTGAGAGATCTGTTGCACGAGTTCGGGACTTGTTTCGTTCAAGGAAAGCACAAGAAGACTATCAGAAAATGAAGATGGCCCATCTGGAAGCAATGGTAAGTAACACACCGTGA 1977 41.53 LLEEISTFDNVSGSNGRNNSNHFGLLNSSYVSTMVSQLNSYAHNGNTIAMASNVPVDIMANEGLQIEDSFGQWINDIVSDFPGSVDDQSSILPHYDEFTSTTINHHPSSVPEQMFIITDISPGWAFTAEKTKILITGFFHEEFAHLAKSNLLCLCGDVCIPTEVVQLGVYRCLVPPHPPGCVNIYLSLDGHKPISQVMNFEYRNQLLDGSGVSLDEKERWEEFEVQMRLLGLLFSTSKSLNILSGKVSQNALKVARNFAQKTSNIANSWAYLHKSIQDNKISFPLAKDGLLELILRNRVREWLLERIIEGSKKSTEFDAYGQGVIHLCAILGYSWAIQLFAWSGLTLDFRDKSGWTALHWAAYCGREKMVAVLLYAGAKPNLVTDPTSENPGGCTAADLAYVKGHDGLAGYLSEKALVAHFQEMSIAGNISGTLQINTTERESVNPENLSEEQLQTEGTLAAYRTAADAAAHINAAFREHSYKQRTKEVQVSTPEMEARNIIAAMKIQHAFRNYEMRRKMAADAHIQQRFRTWKMRQDVLNMRCQAIRVQAVFRGFQVRRHYRKIIWSVGVLEKAILRWRLKRKGFRGLQVEPVEPIAEVRQESDTEEDFYRTSQKQASERVERSVARVRDLFRSRKAQEDYQKMKMAHLEAMVSNTP 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13068235 13072234 + Bda017230.1 Bda03g01166 4425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01166 658 Pfam Ankyrin repeats (3 copies) 302 382 IPR002110 GO:0005515
Bda03g01166 658 SMART ANK_2a 353 382 IPR002110 GO:0005515
Bda03g01166 658 Gene3D - 286 423 IPR036770 -
Bda03g01166 658 Gene3D Immunoglobulins 110 206 IPR013783 -
Bda03g01166 658 ProSiteProfiles IQ motif profile. 542 566 IPR000048 GO:0005515
Bda03g01166 658 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 654 - -
Bda03g01166 658 ProSiteProfiles Ankyrin repeat profile. 353 385 IPR002110 GO:0005515
Bda03g01166 658 SMART iq_5 499 521 IPR000048 GO:0005515
Bda03g01166 658 SMART iq_5 541 563 IPR000048 GO:0005515
Bda03g01166 658 ProSiteProfiles IQ motif profile. 503 529 IPR000048 GO:0005515
Bda03g01166 658 Gene3D - 521 566 - -
Bda03g01166 658 SUPERFAMILY E set domains 117 203 IPR014756 -
Bda03g01166 658 SUPERFAMILY Ankyrin repeat 312 415 IPR036770 -
Bda03g01166 658 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 8 654 - -
Bda03g01166 658 Pfam IPT/TIG domain 116 202 IPR002909 -
Bda03g01166 658 ProSiteProfiles Ankyrin repeat region circular profile. 353 381 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01166 Bda08g00378 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01166 Bda-Chr3:13068235 Bda08g00378 Bda-Chr8:3870823 0 dispersed
Bda03g01166 Bda-Chr3:13068235 Bda03g01181 Bda-Chr3:13857554 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01166 K21596 - fve:101314356 825.469