Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01176 ATGATTGCATTCTGGTGGCCTCTGCTCGTTCTAGGACTTGCTTATGCGATCTGTAGATTCCTCTTGATGCTCATTCCTCATAACGTGCCTTCTATTGAAGTCGACGCCTCCGATGTTCTGGATGACGGAAATCAAACTCAGGAGAACAGCTTCATATATATACCTCCAAGAGGAAGGACGCAACAGTCGGATAAGAAAGTTCAGTGCTACGAGCCCGCAACCATGAAATACTTGGGGTTTCTTCCCGCATTGACTCCAGCTGAGGTCACAAAGAGAGTGGCACTGGCAAGGAATGCTCAGAAAACATGGGCCAAAAGTAGCTTCAAGCAAAGACGGCAGTTCCTAAGAATACTACTGAAGATATCTTCTCGTGATACCGGGAAGACAATGGTAGATGCTTCTTTGGGAGAAATAATGACAACATGTGAGAAGATCACTTGGCTCCTTTCAGAGGGGGAGAAATGGCTAAAGCCTGAATATCGATCTTGCGGAAGATCAATGCTTCACAAGAAAGCCAGAGTCGAGTTTCATCCTCTTGGTGTCATTGGAGCCATTGTCTCTTGGAACTATCCTTTTCATAACATTTTTAATCCAATGCTAGCTGCTGTCTTTTCTGGCAATAGTGTTGTAATTAAGGTCTCAGAACATGCAAGCTGGTCTGGATGTTTTTACTTTCGAATAATCCAAGCTGCACTTGCTGCTGTTGGGGCTCCTGAAAATGTGGTTGATGTGATAACGGGGTTTGCTGAAACGGGAGAGGCATTAGTGTCTTCGGTTGAAAAAATCATATTTGTTGGATCACCTGGTGTGGGTAGGATGATCATGGCAAATGCAGCCGAGACACTCATACCAGTTACACTTGAGTTAGGTGGAAAGGATGCATTTATTGTGTGTGATGACGTGGATTTGGATCATGTTGCACACGTTGCTGTCAGAGCTTCCCTTCAATCAAGTGGACAAAATTGTGCTGGAGCTGAGAGATTTTACGTCCACAGGAATATTTATTCTTCATTTGTTAATGAAGTATCCAAAATTGTGAAGTCTGTTGCTGCTGGCCCACCGCATTGTGGGAAATATGATATGGGAGCCATCTGCCTGCAACAGCACTCTGAAAAGCTTCAAACCCTAGTAAATGATGCTTTAGAGAAAGGGGCAGAAATTGTTGCCCGTGGAAGTTTTGGACATTTGGCTGAAGATGCTGTTGATCAGTATTTCCCCCCGACTGTGATTGTAAATGTGAACCACACTATGAAACTGATGCAAGAGGAGGCATTTGGACCAATAATGCCAATAATGAAATTCAGCACTGATGACGAAGCCATTGCGCTTGCAAATGACTCCAAATATGGGCTTGGCTGTGCTGTTTTTTCTGGCAATCAGCATCGTGCAAAGGAGATAGCTTCACAGATTCATTGTGGAGTTGCTGCAATTAATGATTTTGCATCAACTTATATGTGTCAGTCCTTGCCATTTGGTGGTGTGAAACACAGCGGATTTGGGCGATTTGCAGGAATTGAAGGATTGCGAGCCTGTTGTCTGGTAAAATCAGTTGTTGAGGACAGGTGGTGGCCTTACATCAAAACAAAGATACCTAAGCCTATTCAGTATCCCGTTGCGGAGAACGGTTTCGAGTTTCAGGAGTCGCTAGTGGAAGCATTGTATGGCCTCAACATATGGGACCGATTGCGCGCATTGGTGAATGTTTTGAAGATTGTTTCAGAACACAACTCTGGTTCTACTAACAATGCTGCAGCTACAAGCAAGAGGAGCAGCTGA 1776 44.31 MIAFWWPLLVLGLAYAICRFLLMLIPHNVPSIEVDASDVLDDGNQTQENSFIYIPPRGRTQQSDKKVQCYEPATMKYLGFLPALTPAEVTKRVALARNAQKTWAKSSFKQRRQFLRILLKISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSCGRSMLHKKARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSVVIKVSEHASWSGCFYFRIIQAALAAVGAPENVVDVITGFAETGEALVSSVEKIIFVGSPGVGRMIMANAAETLIPVTLELGGKDAFIVCDDVDLDHVAHVAVRASLQSSGQNCAGAERFYVHRNIYSSFVNEVSKIVKSVAAGPPHCGKYDMGAICLQQHSEKLQTLVNDALEKGAEIVARGSFGHLAEDAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFSTDDEAIALANDSKYGLGCAVFSGNQHRAKEIASQIHCGVAAINDFASTYMCQSLPFGGVKHSGFGRFAGIEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKIVSEHNSGSTNNAAATSKRSS 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13552500 13558604 + Bda017247.1 Bda03g01176 4435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01176 591 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 315 326 IPR016160 GO:0016491
Bda03g01176 591 Pfam Aldehyde dehydrogenase family 62 517 IPR015590 GO:0016491
Bda03g01176 591 CDD ALDH_F15-22 70 521 - -
Bda03g01176 591 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 287 294 IPR029510 GO:0016491
Bda03g01176 591 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 295 490 IPR016163 GO:0016620
Bda03g01176 591 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 4 552 - -
Bda03g01176 591 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 515 IPR016162 GO:0016491
Bda03g01176 591 SUPERFAMILY ALDH-like 56 519 IPR016161 GO:0016491
Bda03g01176 591 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01176 Bda-Chr3:13552500 Bda06g00225 Bda-Chr6:3830672 8.01E-63 dispersed
Bda03g01176 Bda-Chr3:13552500 Bda06g00234 Bda-Chr6:4124204 3.26E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01176 - - gra:105796901 1028.47