Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01183 ATGGAAACTCAACCAGCTGAGGAGCTTCTAAGGAAGATCCAAGAGCTTGAAGCGAGTCACGCTAAGCTAAAGGAAGAGATGTCGAAGCTCATGCTAGCTGGAGGTACTCCAGATTCGAAAACCAATCGGCAAAGTCACCAGTCTCATCGGTCCCACTCGGTATCGCCGCAGCGGTCAAGGTTAGCACCAAGCAGGAGGAGAGGTGGCGGTTTAGACAGTTCAACGGTTGGGGCAGCGTGGAAGCAAGGGTCTGCTTCGTTTAGGCATTCGTCTCCGCTTCAGAGGGAGAGCCGAAGTCACGATCCTCTGCTTGTTGGAGGAGGAGGAAGAAATGGAGGTAGAGGTCCTTCGTCTGGGAATTTCACTGATAGCCAGTACCTGAATATTCTGCAATCCATGGGGCAATCTGTTCATATATTTGATCTAAATGGTCGAATAATCTACTGGAATCGAACTGCTGAAAATACATATGGCTATTCTGCAGCAGAAGCTCTTGGCCAAGATGTAATTGAGATTCTGGCTGATCCCCAAGATTATCAGTTAGCAAATGATATTGTCCGACGCGTTGCTTTGGGGCAGAGTTGGACTGGGCAGTTTCCGGTAAAAAACAAGATGAGCGACAGATTTTTAGTCGTTGCGACCAATACTCCATTCTATGATGACAATAATGACTTGATTGGAATTATTTGTGTATCAAGCAATTCACAGCCATTTGATGATGTACGAATTGGGTTACCGAGTCTGAAACATTCAGAACTAGATTTAAGCAATAGCCGACCCAGAAGTATTATCACGTCAAAACTTGGCCTTGGTCCTCAACAGCCTTTGCAAGTTGCAATTGCATCAAAAATATCGAACTTGGCATCCAAGGTAAGCAACAAAGTGAAGTCAAAGATTATGACAGGAGAACATAGCTCCGATCGGGAAGGTGGAAGCGGAGATAGTCATCACTCTGATCATATTTATGTAGATGCCGGTCTCCCTGATAATAGGGAGGATGCAAATTCAAGTGGAGCTAGCACGCCTCGTGGAGATTTAAACCCCACTACTACCTTCGGTGTTTTTTCATCTATGGAGGAGAAGTATTATGGAAACTCCTCTCGAGAGTCTGCTGATGGTGGCGAAGAAAAGCCTGCAATCCACAAGATAATTACCTCGAGGGCGGAGGCATGGATTAGCAAGAAAGGCATATTGTGGCCATGGAAAGGAATTGAACGAGAAGGATCAGAGGCAAGGACTACCCGTTTTGGTTGGCCCTGGCTGCAAAATGATCTAGAGGCAGAATTACACAATCACAAGAATTCCTCATCGAGCTCGAAACAAGACAACCAGGCTAATGAAAGTAATCGGCCCGTCAATAATGAGGCCTCGGGATCCTGGTCGTCATTCAATATTAACAGTACAAGCAGCGCAAGCAGCTGTGGTAGTAGCAGTAGTAGTGCCGTTAATAAAGTTGATATGGACATAGACTGCTTGGATTATGAAATCTTGTGGGAGGACTTGACTATTGGAGAGCAAATTGGACAAGGTTCTTGCGGGACTGTATATCATGCCCTGTGGTACGGATCAGATGTTGCTGTCAAAGTATTTTCCAGGCAAGAATATTCAGAAGATGTGATACTTTCATTTAGACAGGAGGTATCCCTAATGAAGAAGCTTCGACATCCCAATATTCTCCTCTTTATGGGCGTCGTGACCTCACCTCAACGTCTTTGCATTGTGACTGAGTTCCTTCCACGCGGAAGTCTATTTCGTTTACTTCAGAAGAACGCTGCAAAACTAGATTGGAGACGGCGGGTTCATATGGCATTGGATATAGCACGGGGCATAAATTATCTCCATCACTGCAATCCGCCTGTTATTCACCGTGATTTGAAATCATCAAATCTTCTCATCGATAAAAACTGGACTGTGAAGGTTGGCGATTTTGGTTTGTCCCGTCTCAAATACGACACTTATCTTTCAACTAAGACAGGAAAGGGAACGCCGCAATGGATGGCTCCAGAAGTTCTACGTAATGAACCGTCAGATGAAAAGTCTGACATATACAGCTTTGGAGTCGTCTTGTGGGAGCTTGCCACTGAAAAGATCCCTTGGGATAATCTCAATTCCATGCAGGTTATTGGTGCGGTGGGTTTCATGAACCAGCGGCTGGAAATCCCGAAAGACGTCGATCCACAGTGGGCTTCCATGATTGAGAGCTGCTGTCACAGTGATCCTCTTAGCCGGCCGACGGTCCAGGAACTTCTGGAAAAGCTTAGGGAGCTTCAAAGAAAATACGCAATTCAATTTCAGGCAGCTCGTTCCGGTGTCGGAGCAAATATTCCAAAGGAACTATAG 2340 45.68 METQPAEELLRKIQELEASHAKLKEEMSKLMLAGGTPDSKTNRQSHQSHRSHSVSPQRSRLAPSRRRGGGLDSSTVGAAWKQGSASFRHSSPLQRESRSHDPLLVGGGGRNGGRGPSSGNFTDSQYLNILQSMGQSVHIFDLNGRIIYWNRTAENTYGYSAAEALGQDVIEILADPQDYQLANDIVRRVALGQSWTGQFPVKNKMSDRFLVVATNTPFYDDNNDLIGIICVSSNSQPFDDVRIGLPSLKHSELDLSNSRPRSIITSKLGLGPQQPLQVAIASKISNLASKVSNKVKSKIMTGEHSSDREGGSGDSHHSDHIYVDAGLPDNREDANSSGASTPRGDLNPTTTFGVFSSMEEKYYGNSSRESADGGEEKPAIHKIITSRAEAWISKKGILWPWKGIEREGSEARTTRFGWPWLQNDLEAELHNHKNSSSSSKQDNQANESNRPVNNEASGSWSSFNINSTSSASSCGSSSSSAVNKVDMDIDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSRQEYSEDVILSFRQEVSLMKKLRHPNILLFMGVVTSPQRLCIVTEFLPRGSLFRLLQKNAAKLDWRRRVHMALDIARGINYLHHCNPPVIHRDLKSSNLLIDKNWTVKVGDFGLSRLKYDTYLSTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVVLWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASMIESCCHSDPLSRPTVQELLEKLRELQRKYAIQFQAARSGVGANIPKEL 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13994706 13999310 + Bda017258.1 Bda03g01183 4442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01183 779 Pfam Protein tyrosine and serine/threonine kinase 501 753 IPR001245 GO:0004672|GO:0006468
Bda03g01183 779 ProSiteProfiles Protein kinase domain profile. 501 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01183 779 CDD STKc_MAP3K-like 507 753 - -
Bda03g01183 779 Gene3D Phosphorylase Kinase; domain 1 494 578 - -
Bda03g01183 779 SUPERFAMILY PYP-like sensor domain (PAS domain) 128 231 IPR035965 -
Bda03g01183 779 MobiDBLite consensus disorder prediction 298 352 - -
Bda03g01183 779 MobiDBLite consensus disorder prediction 333 352 - -
Bda03g01183 779 Pfam PAS fold 125 231 IPR013767 GO:0006355
Bda03g01183 779 CDD PAS 133 231 IPR000014 -
Bda03g01183 779 MobiDBLite consensus disorder prediction 436 458 - -
Bda03g01183 779 MobiDBLite consensus disorder prediction 35 60 - -
Bda03g01183 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Bda03g01183 779 MobiDBLite consensus disorder prediction 21 120 - -
Bda03g01183 779 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 34 774 - -
Bda03g01183 779 SMART pas_2 124 191 IPR000014 -
Bda03g01183 779 TIGRFAM sensory_box: PAS domain S-box protein 125 231 IPR000014 -
Bda03g01183 779 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 34 774 - -
Bda03g01183 779 MobiDBLite consensus disorder prediction 77 92 - -
Bda03g01183 779 ProSiteProfiles PAS repeat profile. 122 193 IPR000014 -
Bda03g01183 779 Coils Coil 746 766 - -
Bda03g01183 779 MobiDBLite consensus disorder prediction 430 458 - -
Bda03g01183 779 MobiDBLite consensus disorder prediction 300 327 - -
Bda03g01183 779 SUPERFAMILY Protein kinase-like (PK-like) 485 752 IPR011009 -
Bda03g01183 779 Gene3D PAS domain 134 236 - -
Bda03g01183 779 Coils Coil 6 33 - -
Bda03g01183 779 Gene3D Transferase(Phosphotransferase) domain 1 580 766 - -
Bda03g01183 779 SMART serkin_6 501 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01183 Bda08g00332 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01183 Bda-Chr3:13994706 Bda08g00332 Bda-Chr8:3407379 0 dispersed
Bda03g01183 Bda-Chr3:13994706 Bda03g01169 Bda-Chr3:13341480 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69561 PF07714 PK_Tyr_Ser-Thr 1.90E-65 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01183 - - pop:7485826 1107.43