Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01185 | ATGCTCCAGGCATTGATGAATCTACTCTCTCTTTGCTGGAAGCCATTCGGCGATGAAGGTGAAAGACTTGACTCTGTTGGAGTTGTCGGAGCTAGTTCTGGTGAAAGAGATGGGAAGGATTGCCTGCTTTGGTTCCATGATTTTGGCAATTACGCTTCCGGCGAATTCTCCATGGCTGTGGTGCAGGCGAACGTAGTTCTTGAGGACCATAGCCAGATTGAATCGGGACCTTTCGGCACCTTCGTTGGTGTCTACGATGGACATGGTGGCCCGGAGGCAGCCCGTTATGTTTGTGACAACTTGTTTGGGCATTTCCAAGCAATATCAACTGAAATGAATGGAGTTGTGACTCCTGAATCAATTCGAAATGCTTTTCGCCAATCAGAGGATGGCTTCACGGCCTTTGTCTCAGAGCTATGGAGTACTCAGCCCCAATTAGCAACAGTTGGATCTTGTTGTTTAGTTGGAGTGATATGTCAGCAGACTCTCATTTCAAGATCTATAGGTGATGTCTATATGAAACATTCCCAGTTCAATAACGAAAGGATTAGTGATAAATTCAGAATTCCTGAACCAGTGAGCACGCCAATTTTAAGTTCTGTTCCAGAAATTACTACGCATCGGATTCATCCAAACGACTCTTTTCTTATATTTGCATCTGATGGGCTGTGGGAACACTTGAGTAATGAAAAAGCTGTGGACATAGTTCATAGTCATCCACGTGCAGGAAGTGCAAAAAGGCTAGTGAAGGCTGCACTTCAAGAGGCCGCTAGAAAACGAGAAATGCGTTACTCAGATCTTCGAAAAATTGACAAAAAGGTTAGACGGCACTTCCATGATGATATAACCGTTATTGTTTTATTCTTAAACCACGGCCGAATATCCAGAGGCATTACCCTTGACCACCCATTGTCGATTCGAAATGCACTGGATTCATAG | 939 | 44.3 | MLQALMNLLSLCWKPFGDEGERLDSVGVVGASSGERDGKDCLLWFHDFGNYASGEFSMAVVQANVVLEDHSQIESGPFGTFVGVYDGHGGPEAARYVCDNLFGHFQAISTEMNGVVTPESIRNAFRQSEDGFTAFVSELWSTQPQLATVGSCCLVGVICQQTLISRSIGDVYMKHSQFNNERISDKFRIPEPVSTPILSSVPEITTHRIHPNDSFLIFASDGLWEHLSNEKAVDIVHSHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHGRISRGITLDHPLSIRNALDS | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 14072695 | 14075373 | + | Bda017260.2 | Bda03g01185 | 4444 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01185 | 312 | ProSitePatterns | PPM-type phosphatase domain signature. | 81 | 89 | IPR000222 | GO:0043169 | |
Bda03g01185 | 312 | SMART | PP2C_4 | 42 | 287 | IPR001932 | - | |
Bda03g01185 | 312 | ProSiteProfiles | PPM-type phosphatase domain profile. | 52 | 289 | IPR001932 | - | |
Bda03g01185 | 312 | Pfam | Protein phosphatase 2C | 164 | 259 | IPR001932 | - | |
Bda03g01185 | 312 | PANTHER | ALPHABET, ISOFORM E-RELATED | 164 | 311 | - | - | |
Bda03g01185 | 312 | PANTHER | ALPHABET, ISOFORM E-RELATED | 3 | 163 | - | - | |
Bda03g01185 | 312 | PANTHER | PROTEIN PHOSPHATASE 2C 42-RELATED | 164 | 311 | - | - | |
Bda03g01185 | 312 | SUPERFAMILY | PP2C-like | 64 | 290 | IPR036457 | - | |
Bda03g01185 | 312 | CDD | PP2Cc | 56 | 289 | IPR001932 | - | |
Bda03g01185 | 312 | Gene3D | - | 164 | 295 | IPR036457 | - | |
Bda03g01185 | 312 | Gene3D | - | 50 | 163 | IPR036457 | - | |
Bda03g01185 | 312 | PANTHER | PROTEIN PHOSPHATASE 2C 42-RELATED | 3 | 163 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g01185 | Bda08g00331 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01185 | Bda-Chr3:14072695 | Bda15g01025 | Bda-Chr15:19217571 | 2.04E-74 | dispersed | |
Bda03g01185 | Bda-Chr3:14072695 | Bda08g00331 | Bda-Chr8:3402194 | 2.69E-122 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01185 | K01102 | - | ath:AT3G17090 | 366.696 |