Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01185 ATGCTCCAGGCATTGATGAATCTACTCTCTCTTTGCTGGAAGCCATTCGGCGATGAAGGTGAAAGACTTGACTCTGTTGGAGTTGTCGGAGCTAGTTCTGGTGAAAGAGATGGGAAGGATTGCCTGCTTTGGTTCCATGATTTTGGCAATTACGCTTCCGGCGAATTCTCCATGGCTGTGGTGCAGGCGAACGTAGTTCTTGAGGACCATAGCCAGATTGAATCGGGACCTTTCGGCACCTTCGTTGGTGTCTACGATGGACATGGTGGCCCGGAGGCAGCCCGTTATGTTTGTGACAACTTGTTTGGGCATTTCCAAGCAATATCAACTGAAATGAATGGAGTTGTGACTCCTGAATCAATTCGAAATGCTTTTCGCCAATCAGAGGATGGCTTCACGGCCTTTGTCTCAGAGCTATGGAGTACTCAGCCCCAATTAGCAACAGTTGGATCTTGTTGTTTAGTTGGAGTGATATGTCAGCAGACTCTCATTTCAAGATCTATAGGTGATGTCTATATGAAACATTCCCAGTTCAATAACGAAAGGATTAGTGATAAATTCAGAATTCCTGAACCAGTGAGCACGCCAATTTTAAGTTCTGTTCCAGAAATTACTACGCATCGGATTCATCCAAACGACTCTTTTCTTATATTTGCATCTGATGGGCTGTGGGAACACTTGAGTAATGAAAAAGCTGTGGACATAGTTCATAGTCATCCACGTGCAGGAAGTGCAAAAAGGCTAGTGAAGGCTGCACTTCAAGAGGCCGCTAGAAAACGAGAAATGCGTTACTCAGATCTTCGAAAAATTGACAAAAAGGTTAGACGGCACTTCCATGATGATATAACCGTTATTGTTTTATTCTTAAACCACGGCCGAATATCCAGAGGCATTACCCTTGACCACCCATTGTCGATTCGAAATGCACTGGATTCATAG 939 44.3 MLQALMNLLSLCWKPFGDEGERLDSVGVVGASSGERDGKDCLLWFHDFGNYASGEFSMAVVQANVVLEDHSQIESGPFGTFVGVYDGHGGPEAARYVCDNLFGHFQAISTEMNGVVTPESIRNAFRQSEDGFTAFVSELWSTQPQLATVGSCCLVGVICQQTLISRSIGDVYMKHSQFNNERISDKFRIPEPVSTPILSSVPEITTHRIHPNDSFLIFASDGLWEHLSNEKAVDIVHSHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHGRISRGITLDHPLSIRNALDS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14072695 14075373 + Bda017260.2 Bda03g01185 4444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01185 312 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bda03g01185 312 SMART PP2C_4 42 287 IPR001932 -
Bda03g01185 312 ProSiteProfiles PPM-type phosphatase domain profile. 52 289 IPR001932 -
Bda03g01185 312 Pfam Protein phosphatase 2C 164 259 IPR001932 -
Bda03g01185 312 PANTHER ALPHABET, ISOFORM E-RELATED 164 311 - -
Bda03g01185 312 PANTHER ALPHABET, ISOFORM E-RELATED 3 163 - -
Bda03g01185 312 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 164 311 - -
Bda03g01185 312 SUPERFAMILY PP2C-like 64 290 IPR036457 -
Bda03g01185 312 CDD PP2Cc 56 289 IPR001932 -
Bda03g01185 312 Gene3D - 164 295 IPR036457 -
Bda03g01185 312 Gene3D - 50 163 IPR036457 -
Bda03g01185 312 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 163 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01185 Bda08g00331 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01185 Bda-Chr3:14072695 Bda15g01025 Bda-Chr15:19217571 2.04E-74 dispersed
Bda03g01185 Bda-Chr3:14072695 Bda08g00331 Bda-Chr8:3402194 2.69E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01185 K01102 - ath:AT3G17090 366.696